Gene Sare_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0742 
Symbol 
ID5707774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp825836 
End bp826414 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID641270261 
Productphosphoesterase HXTX 
Protein accessionYP_001535652 
Protein GI159036399 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0397281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0150173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG TGGCCGGAGG GGCGGCACAG GGAGCGGATC GGTGGGGCGG TTCGCCGGCG 
GCCGACGGAA CGATCCAGAT CGGCATCGCG GTGGACATTC CCGAGCCCTG GGGGAGCATG
CTGACCCGGC GGCGGATGGA GGCAGGCGAC CAGCAGGCTG TCCCGGCGCA TGTGACGTTG
CTCGGGCCGA CCGAGATCCC GGGCGCCGCC CTGCCGGCTG TCGAACGGCA CCTGACCGCG
GTCGCCGCCG CGCACCTTCC GTTCACTCTG CATCTGCGCG GCACCGGCAC GTTCCGGCCG
GTTACCCAGG TGGTCTTTGT GACGGTCGCG GCCGGGATCA GCGAATGTGA GCTGCTCGCC
GCGGCGATCC GGGCCGCGCC CGAGTTGCGC CGGGAAACAC GCTTCCCTTA CCACCCGCAT
GTCACCGTGG CGCAGGACGT CCCGCCCGCG GCGCTGGACA AGGCGTACGA GGATCTGGCT
GACTTCTCGG CGATGTTCGA GGTGGAGGCG TTCACCCTGT TTTCGCACAG TGGACAGACG
AGATGGCAGC CGCGGCGGGA CTTTCGGCTC GGTGGCTGA
 
Protein sequence
MEAVAGGAAQ GADRWGGSPA ADGTIQIGIA VDIPEPWGSM LTRRRMEAGD QQAVPAHVTL 
LGPTEIPGAA LPAVERHLTA VAAAHLPFTL HLRGTGTFRP VTQVVFVTVA AGISECELLA
AAIRAAPELR RETRFPYHPH VTVAQDVPPA ALDKAYEDLA DFSAMFEVEA FTLFSHSGQT
RWQPRRDFRL GG