Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0612 |
Symbol | |
ID | 5704609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 692182 |
End bp | 694152 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641270138 |
Product | recombinase |
Protein accession | YP_001535531 |
Protein GI | 159036278 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGCA CCCTGCCCGA CTGGCTCCGC CCACCCGCCA CCACCGCCCC GAAGCGGACG ATACGGGTCG CGTTCCTCGG GCGTACCTCG ACCGAGGAGC AGCAGGACCC CACCCTGTCG ATCCCCCGAC AGTTGACCAA CTCCGAACGG GCTCTGCTGC CCAGCATGGT CATCGTGGCG TGGTTCTGGG ACGTGGAATC CTCCCGCAAG GAACTCAGCC AACGCGGCCG GGGCACCGCG TGGCAGAAGT TCGACATCGC CGTGCAACGA GACGGCGGCC TCGCCGACAT GCTCGACGAG GCCACCTCAC CCGATCGCCG CTTCGACGTC GTCATCTGCG AGTCGATCGA CCGCATCGCC CGCTGGACCC ACCAGGGCAC CAAGATCGAG CACGACCTCG AACTCGCCGG AGTGCCGCTG CTGGCCGCCG ACGAGCCGGT CATGCAGTCG AACAGCCGTA AACGGGCCGC CCAGATCCTC CTACGTCGCA CCAAGCAGGG CGTCGCCGAG TGGTACATGA TCGAGATGCT GGAGAAGTCG TGGGACGGCT TCGAGGAACA CACCACCCAG GGCTGGAACG TCGGCAAGCC CCCGTACGGC TACCTCGCCG AGAAGCACAA ACACCCGGTC CCCGCCAAAC GCGCCGAGGG CAAGCACAAG ACCAAGCTGA AGATCGACCC CGACCGAGGG CCGGTGGTCG AGCAGATCTA CGCCTGGCGC ATCGACGAGA AGCTGTCCTA CCGGGCCATC GCCGAGCGGC TTAACACCGA CCCCGACCGC TACCCGCCCC CACAACCCGT CGACCCCACC CGCGCGGTCG GACGATGGAC CGGCTCGGCG GTCCGCGAGA TCCTCGTCAA CCCCAAGTAC ACCGGCCACA TGGTGTGGAA TCGGCGCTCG ACCAAAGACA AGCTTCACCC CGGCAAGGTC AACCCCCGTG AGCAGTGGGT CGTCTCCACG CAGCCCACCC ACCCGGGCAT CGTGCCGATC GAGACGTTCC TCGCCGCCCA AAACGTGAGC CGATCCCGAG AACGGTCACG CGCCGACGCC CACCACGGGA CCCCCAACCG GCATAGGCAG ACCAAACGGG TCTACGCGCT GCGCTCCTAC GTCTGGTGCA CCCCGTGCCA GCGGCGCATG TTCGGCCGCA CCGTCACCGG ATACACCTAC TACTCCTGCC AACCCCGAGA GAGGGCCATC CCCGAGGGGC ACCCGAGCAT GATCTCCGTG ACCGAGGAGG TGCTGCTCGA CTTCGCCGAT CGGTTCTTCA ACACCTACGT CCTCGGCCCC GACCGGGTAC GACTCGCCGA ACGCAGCCTC GACATCACCG CCCAACAGGC AGCCGACGAG CAACGGCAAC AGATCGCCGT ACTACGGCGG ACTCTGGACG ACATCACCAC CCGCCGCCGT CGCCTCCTAC GGGTCATCGA GGAGAACGAC GACCCAGACG GCAGCGTGTT CGCGGAGATC TCCGAACGCC GAGCCCAACT CGACCGTGAC CGCGAGATCA AGACCGCTGA ACTCGCCCAC CTCGAAGAAA CCACGCCGAA CGACCCCGGC AACGCCGACA TCCTCGCCGA CCTCCCCGAG ATGGAAATCA AACTCAGCCT GCTACCCACG GACCGTCTTC GTCGCCTTCT GGACGCCTTC GCCGTGCAGA TCTACCACGA CGTCCGCACC AACCAGGTCG CGTTCCGAGC CACCGTCAGC CAACACGCCG CCCCACACCT GGCCCGGCTA ACCCGCGCTA CCGCAGATGG CCCCCGCCCC GCCACCCACC GCCATACCAG CGCAAACGAC GCTGCCCCCG CCGACAACGA CGGCGGGGGC AGTGACCATT TGCAGTTCTG TGACATGCCC CGCCGGGGGC ACCTCGAAGA CCAGCCAAAA CGCCATCTGG CCTGCGGATA CGCTTCTCCG TCGATTGGCC GAGGTGTGCA TCCGCATGCC ACCCGAAGCC GCCGTTTGTA G
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Protein sequence | MTSTLPDWLR PPATTAPKRT IRVAFLGRTS TEEQQDPTLS IPRQLTNSER ALLPSMVIVA WFWDVESSRK ELSQRGRGTA WQKFDIAVQR DGGLADMLDE ATSPDRRFDV VICESIDRIA RWTHQGTKIE HDLELAGVPL LAADEPVMQS NSRKRAAQIL LRRTKQGVAE WYMIEMLEKS WDGFEEHTTQ GWNVGKPPYG YLAEKHKHPV PAKRAEGKHK TKLKIDPDRG PVVEQIYAWR IDEKLSYRAI AERLNTDPDR YPPPQPVDPT RAVGRWTGSA VREILVNPKY TGHMVWNRRS TKDKLHPGKV NPREQWVVST QPTHPGIVPI ETFLAAQNVS RSRERSRADA HHGTPNRHRQ TKRVYALRSY VWCTPCQRRM FGRTVTGYTY YSCQPRERAI PEGHPSMISV TEEVLLDFAD RFFNTYVLGP DRVRLAERSL DITAQQAADE QRQQIAVLRR TLDDITTRRR RLLRVIEEND DPDGSVFAEI SERRAQLDRD REIKTAELAH LEETTPNDPG NADILADLPE MEIKLSLLPT DRLRRLLDAF AVQIYHDVRT NQVAFRATVS QHAAPHLARL TRATADGPRP ATHRHTSAND AAPADNDGGG SDHLQFCDMP RRGHLEDQPK RHLACGYASP SIGRGVHPHA TRSRRL
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