Gene Sare_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0557 
Symbol 
ID5705790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp635576 
End bp636250 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID641270083 
ProductMerR family transcriptional regulator 
Protein accessionYP_001535477 
Protein GI159036224 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000848982 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGATCT CGGATCTTAG CAGGAAATCA GGGGTACCGG TCGCCACCAT CAAGTTTTAT 
CTACGCGAAA AACTCCTTCC ACCCGGAACC CTAACCGGTC GGAATCAAGC AATTTACGGC
GACGTGCACC TACGTAGACT GCTGTTGATC CGGTCGTTCA CCAACATCGC CCAACTCGAT
CTCTCCTCCG TGGGAGAACT GCTTTCCGCG ATTGCGGACG ACGGTTTGCC GCTGCCCGGC
CTCTACGAGG CCGCCGACCG GGCGGTGTTC GGCGTCGATC CGTCGGCCAC GGGTTCAGCG
GAGGTGAATC ACGCCAAAAT AGAAGTCAAT GAATTCCTCG ACAAGCTGGG CTGGCGTATC
TCCGCCGACA CTCCGGCCGC CGGGCGGCTG GCCCAGGTGC TGGTGGCCCT GCGAGCCCTG
GGTTGCGAGT GCGGCATCGA GTTCTTCGAA CCCTGCGCCC AGGCAGCCGA GCGGTTTGCC
GCGCAGGAAC TCGACCTGGT GCCGGAGGAC CTCGACCGCA CCGAGCGGGC TCCAGCGGTG
GTGCGGTCGG TCATGCTCGG CGTCGCCACC GCCGCCCTGC ACCGGATGGC TCGGGAACAT
CTCGTGAATG AACGCTTCGC CAACAGTGCG GTCACCCACG GCAGCGAAGT CCCCCAGCCC
GCTCCCGTGG GCTGA
 
Protein sequence
MRISDLSRKS GVPVATIKFY LREKLLPPGT LTGRNQAIYG DVHLRRLLLI RSFTNIAQLD 
LSSVGELLSA IADDGLPLPG LYEAADRAVF GVDPSATGSA EVNHAKIEVN EFLDKLGWRI
SADTPAAGRL AQVLVALRAL GCECGIEFFE PCAQAAERFA AQELDLVPED LDRTERAPAV
VRSVMLGVAT AALHRMAREH LVNERFANSA VTHGSEVPQP APVG