Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0557 |
Symbol | |
ID | 5705790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 635576 |
End bp | 636250 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641270083 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001535477 |
Protein GI | 159036224 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000848982 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGATCT CGGATCTTAG CAGGAAATCA GGGGTACCGG TCGCCACCAT CAAGTTTTAT CTACGCGAAA AACTCCTTCC ACCCGGAACC CTAACCGGTC GGAATCAAGC AATTTACGGC GACGTGCACC TACGTAGACT GCTGTTGATC CGGTCGTTCA CCAACATCGC CCAACTCGAT CTCTCCTCCG TGGGAGAACT GCTTTCCGCG ATTGCGGACG ACGGTTTGCC GCTGCCCGGC CTCTACGAGG CCGCCGACCG GGCGGTGTTC GGCGTCGATC CGTCGGCCAC GGGTTCAGCG GAGGTGAATC ACGCCAAAAT AGAAGTCAAT GAATTCCTCG ACAAGCTGGG CTGGCGTATC TCCGCCGACA CTCCGGCCGC CGGGCGGCTG GCCCAGGTGC TGGTGGCCCT GCGAGCCCTG GGTTGCGAGT GCGGCATCGA GTTCTTCGAA CCCTGCGCCC AGGCAGCCGA GCGGTTTGCC GCGCAGGAAC TCGACCTGGT GCCGGAGGAC CTCGACCGCA CCGAGCGGGC TCCAGCGGTG GTGCGGTCGG TCATGCTCGG CGTCGCCACC GCCGCCCTGC ACCGGATGGC TCGGGAACAT CTCGTGAATG AACGCTTCGC CAACAGTGCG GTCACCCACG GCAGCGAAGT CCCCCAGCCC GCTCCCGTGG GCTGA
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Protein sequence | MRISDLSRKS GVPVATIKFY LREKLLPPGT LTGRNQAIYG DVHLRRLLLI RSFTNIAQLD LSSVGELLSA IADDGLPLPG LYEAADRAVF GVDPSATGSA EVNHAKIEVN EFLDKLGWRI SADTPAAGRL AQVLVALRAL GCECGIEFFE PCAQAAERFA AQELDLVPED LDRTERAPAV VRSVMLGVAT AALHRMAREH LVNERFANSA VTHGSEVPQP APVG
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