| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0542 |
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| Symbol | |
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| ID | 5705642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 613314 |
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| End bp | 614015 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270068 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001535462 |
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| Protein GI | 159036209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.654056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00189431 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGACA TCCGGCAACT GCCGGTCACC CTGGACCGGG TGACGACCAG TCGGGGTGAA
CTGGTGCTGC GTGAGACGAA CGGCCACTAC GAGGTCATCA GCAACGGCGT CTTCCTCATG
GACACCTCGG ATGGCCGTTC GGAACGCCTG CTGGTCGACG CCGCCGTGCA CAGGTGCACG
ACACCGGCAC CCCGGCTACT CGTCGGCGGT CTCGGCGTCG GGTTCTCACT GGTGCGCGCC
ATCGAGTACA CGCACCTCGC CGCCATCGAC GTCGTCGAGA TCGAGGCCGC GGTGATCGGC
TGGCACACCA GCCACCTGCA CCACCTCACC AGCAGGGCGA TGGCTGACCC CCGCGTACGG
ATCATCGAGG CGGACATCCT CGCCTGGATG GCGGACACCG GCGACCAGTA CGACGCCATC
TGCCTGGACA CCGACAACGG GCCCAACTGG CTGGTCTTCG AGGCCAACGC CGAGCTGTAC
GGCCACCGAG GACTCGACCT GGTGGTCCGT CGGCTACGGC CGGGGGGCGT CCTGGCGATC
TGGAGTGCGA GCCGCGACGA CTCCTTCGAG CAGCGGCTCC GGGGCCGCTT CGGCGACCTG
GTGACGCTGG AGACACCGAC CGACACGGGC GCGCCGGACG TGGTCTACGT CGTCTGGGCT
GCCACCGCAG CGCGTGGAGA GCAACCGGAG TCGCTGGCGT GA
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| Protein sequence | MSDIRQLPVT LDRVTTSRGE LVLRETNGHY EVISNGVFLM DTSDGRSERL LVDAAVHRCT
TPAPRLLVGG LGVGFSLVRA IEYTHLAAID VVEIEAAVIG WHTSHLHHLT SRAMADPRVR
IIEADILAWM ADTGDQYDAI CLDTDNGPNW LVFEANAELY GHRGLDLVVR RLRPGGVLAI
WSASRDDSFE QRLRGRFGDL VTLETPTDTG APDVVYVVWA ATAARGEQPE SLA
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