Gene Sare_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0513 
Symbol 
ID5705531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp583075 
End bp584367 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content72% 
IMG OID641270039 
Productmajor facilitator transporter 
Protein accessionYP_001535433 
Protein GI159036180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.629333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000815548 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACCGAGG TCCGGCAGGC CCGGCGGGCT GGCAGCCGGT GGGCGATCGA CCTGCGCCCG 
CTGGCGGTGC CGGCGTTCCG CCGGATGTGG CTCGGCAACA GCATGGCGAT GTTCGGGTTC
CAGCTCACCT CGGTCGCTGT CCCGGTGGAG ATGTACTCGC TCACCGGGAA GTCGTCCTGG
GTCGGCCTGC TCGGCCTCGC CGGCTTCCTT CCCCTGCTGA TCTTCGGGCT CTGGGGTGGC
GCCGTGGCCG ACGCGCGGGA CCGGCGTCGC GTGCTACTCG CCGGCTCGGC GTTGCTCTGG
GCCACGATGC TCGGTCTGCT CGCGCACGCG TGGCTGGGCG TCGGTAGTCC GGTTGTGCTG
CTGGTACTGG TAGCCGTTCA CTCGGTCGGG TTCGCGATCA GTGCGCCGGC CCGTACTGCG
GCTCTGCCCC GACTGCTGCC AGCCGGGCTG GTACCGGCGG CAGCCACGCT GAACTACACC
ACCTTCATGG TGGCCTCGGT GGTCGGTCCG CTCGCCGCTG GTCTGATCTT CGCGGTCTGC
GGTACCCAGC CCGGCCTGCC GATCGCGTAC GCGGCGGACA TGCTCCTGTT CACCGGGCTG
ATGGTGGCCG CGCTGCGGCT GCCGGCGATG CCACCGGAGC CGCTCCGCGA AGGCGAGGTG
CGTCGCGGCG GGCTGGCCGG GATCAGCGAT GGCCTCCGGT ACCTGACCAC CACACCGGTG
CTGCTGCTGT CGTTCGCCAT CGACCTGATC GCGATGGTCC TGGCGTTGCC GCGGGCGTTG
TTCCCGGAAA TCGCCGAGGA GCGTTTCGGC GGTGGGGCAG CGGTTGGTTG GCTCTTCAGT
GCCATCGCGA TCGGCTCCCT GTTGGCCGGG CTCACCTCCG GGTGGATCGG TCGGCTGCGC
CGGCAGGGGC TTGGCTTGGT GGCGGTGGTG GTCGGCTGGG GTCTGGCCGT CGCGGCAGCG
GGGTTGGCCC AGCAGCTCTG GCTGATGGTT CTCCTGCTCG CGGTGGCCGG TGCGGCAGAT
CTGGTGAGCG CGGTGCTGCG CCAGTCGATG TTGTTGGTCT ACGCGCCGGA CCGGATGCGG
GGTCGGCTTC AGGGTGTGAA CACGGTGGTC GTGGCCGGGG GGCCGCGCCT CGGCGATCTG
CGGGCCGGCG CGATGGCGGG TGGCTTCGGC AGCGGTGTGG CCTGGGTCGG CGGTGGACTG
CTGGCGGCCG TACTCGCGCT CGGGCTGGCG GTGGCGTTCC CGGCCCTGGT CCGCTACCGA
GCGGCCACGA TGTCAAGCGG GCAGCGGGCC TGA
 
Protein sequence
MTEVRQARRA GSRWAIDLRP LAVPAFRRMW LGNSMAMFGF QLTSVAVPVE MYSLTGKSSW 
VGLLGLAGFL PLLIFGLWGG AVADARDRRR VLLAGSALLW ATMLGLLAHA WLGVGSPVVL
LVLVAVHSVG FAISAPARTA ALPRLLPAGL VPAAATLNYT TFMVASVVGP LAAGLIFAVC
GTQPGLPIAY AADMLLFTGL MVAALRLPAM PPEPLREGEV RRGGLAGISD GLRYLTTTPV
LLLSFAIDLI AMVLALPRAL FPEIAEERFG GGAAVGWLFS AIAIGSLLAG LTSGWIGRLR
RQGLGLVAVV VGWGLAVAAA GLAQQLWLMV LLLAVAGAAD LVSAVLRQSM LLVYAPDRMR
GRLQGVNTVV VAGGPRLGDL RAGAMAGGFG SGVAWVGGGL LAAVLALGLA VAFPALVRYR
AATMSSGQRA