Gene Sare_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0485 
Symbol 
ID5704832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp554350 
End bp555711 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content73% 
IMG OID641270011 
Producthypothetical protein 
Protein accessionYP_001535405 
Protein GI159036152 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.445268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.687449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA CCGAGGACTT CCGCACGACA CTGCGCACCG CGGTGACCGG CCGGCCCGAC 
ACCCCGCTGG TCCTGATCGG CAACTTCGAG GTCGAGGACG AGTGGGCCCG CACCGAACGG
GGACTGCCCC GACTCACCGT GAGTGGCTCC GGCCGCGCCG TGGCCAACCG GATGGACGAG
CTCGCGCTGC TGCTCGCGGC TGAGGGCGAC CGGGTGGTGC TCAAGGACGC ACCCGATCCC
GATCACCTCG CCCAGCTGGC GGGGCTGGGC CTGACGTTGC CGCACATCCT GGTGCCACGC
GCACAGGATC CGCAACGGAC GGTCAGCGCC GACGCACTCG CCGACAACGC CCTGATCACG
ACACTCGGCA CGCTGGGCGA CGCCGGCTTC CGCCTTGCCC CGCACGGCGT CTCCGCCGTC
GAGGAAGAGC TGTCCGCTCG GTCGGGGCTA CCGCTGGCCA CGCCGACCGC GGCGACCTGC
AAGGCGGTGA ACAGCAAGAT CTACAGCCGA CTGCTCGCCA CCGACCTCGC GCTGCGGCAG
CCGCCCGGCC GTACCTGCGT CACCCTCGAC GAGTTGGCGG ACGCGCTCGC CTGGGCGGCC
CGGCTGATCG ATGCCGGCGG CCGGGTGGTG GTCAAGGACG CCTTCGGCGT ATCCGGTAAG
GGCATCACCG TGGTCGACAC CGGCCGCCGG CTCGACCAGG TACGGCGGAT GGTGCACTCC
CGGGCCGCCC GCAGCGGCCG CACCGATGTG GCGCTGGTCG TCGAGGAGTG GGTGGCCAAG
CGCGCCGACC TGAACTACCA CTTCGTGGTG GGCCGCGACG GCACGGTGAG CTTCGACTTC
GTCAAGGAGG CCCTGACCGA CAACGGCGTG CATCAGGGCC ACCGCTTCCC GGCCCGCCTC
AGCGCGACAC AGGTCGGCGA CCTCGCCGCC GCCGCCGAGA CGATCGGCGG GCGACTGGCC
CGCGACGGCT ACTTCGGTGT GGTCGGCGTG GACGCCATGG TGGACCCGGA CGACGGCCTG
TACCCGATCG TCGAGATCAA CGCCCGCAAC AACATGTCCA CCTACCAGAC CGTGGTGCAG
CAGCGCCTCG TGCCGCCCGG CGCCGAGGTG CTGGCCCGGC ACTACCCACT ACGGACACCC
GAGCCGCTGC CGTTCGCGGC CCTGCGCCGG CTGCTCGACG GCGTCCTGCT CACCCCGGGC
GGCCGGACCG GCCTGGTGGT GACCGCCTTC GCCACGGTCA ACGCCGCCCC GCCGGACGGC
CGCCTGTACG CCCTGCTCGT GGCCGACACG GCGGCGCGCC TGACCGCGCT CGACGCCGAG
GTCGCCCGGC GCCTGACCAC CGTCACCGAG GAGACGAGAT GA
 
Protein sequence
MTMTEDFRTT LRTAVTGRPD TPLVLIGNFE VEDEWARTER GLPRLTVSGS GRAVANRMDE 
LALLLAAEGD RVVLKDAPDP DHLAQLAGLG LTLPHILVPR AQDPQRTVSA DALADNALIT
TLGTLGDAGF RLAPHGVSAV EEELSARSGL PLATPTAATC KAVNSKIYSR LLATDLALRQ
PPGRTCVTLD ELADALAWAA RLIDAGGRVV VKDAFGVSGK GITVVDTGRR LDQVRRMVHS
RAARSGRTDV ALVVEEWVAK RADLNYHFVV GRDGTVSFDF VKEALTDNGV HQGHRFPARL
SATQVGDLAA AAETIGGRLA RDGYFGVVGV DAMVDPDDGL YPIVEINARN NMSTYQTVVQ
QRLVPPGAEV LARHYPLRTP EPLPFAALRR LLDGVLLTPG GRTGLVVTAF ATVNAAPPDG
RLYALLVADT AARLTALDAE VARRLTTVTE ETR