| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0410 |
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| Symbol | |
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| ID | 5708224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 470765 |
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| End bp | 472195 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641269935 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001535330 |
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| Protein GI | 159036077 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00320787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGTCGA TCTGGCTCCG CCGAGAGGGC CAGGAGCGGT ACCGGGCTCG TAGCATGGGG
CGCGTGCGCC GCACCGGCTC GCCGCGACTG CCCGCAGCCC CGCGTCTGCT CATTGCGGGG
CTCGCGGTTG TCGTGTTGAC CGCCACCACC GCCGCCGCGT GCGATCGGGA GCAGACACCG
GTCGCGCTCG CCGCCGCTGG CCGCAGTTCT GTCGTCGAGA CCATCGACGC GCCGGCCACG
GTGATCGCCC GGTCGGCGGC CACCCTCACC GCGCCCGCCG ATGGGACGCT CGCGAGCCTT
CGGGTGCAGC CCGGCCAGCG GGTGAAGCGC GGCCAGGTGC TCGCCGTCAT CGACTCGCCG
CCGGCCCAGG AAAGGCTCCG GCAGGCGAAG GAAGCCCTCG CCGCTGCTCG CCGGGCCAGT
CGCGGCGGCG GGGGTGACCT GGCCGGCGGG TTGCGCGGCA CTGACCGCGC CGCCGACGAG
ACCTACGAGG CGGCCCGCGC CGCGGCCGGG AAGATCAGCG ACCCCGAGCT ACGGGAGGCG
CTGTTGCGTC AGGTCCGCGA GGCCCAGCGG CGGTACGAGC GGGCCGCCCA CGCCGCCGAC
CGTGCGGTGC GGGCGGTCCA GCGTGGGGTC AACGATCTGC GCGCCGCCGT CGCCGCCCTC
GCCACCGCCC AACGACTCCA GGCCCAGCAG GCGTACGACC TGGCGACGGC GGCGGTGGAC
GCGCTGACTC TGCGTGCGCC GGTCGCCGGG ATCGTCCAGC CGGGCGGGCC GGCCACCGGT
GGCGGGGTCT CGTCGGACGC GTTGGCGGGA CTGCTGGCCG GCGGCGCCCC GGTCGGGGTC
GACCCGGGGG CACTCGGCCC GGCCCCGCCG CCAGGAGTGG ACGTCGCGGT CGGTGCGGGC
GGTCTGGTCG CCGCCGGCAC ACCGGTGCTG ACCATCGTCG ACACCAGCCA GCTCGGGCTG
CTCGCCGAGG TCGACGAGAC CGACATCCTG CTGGTCCGGG CCGGGCTCGC CGCGACAGTG
GAGCTGGACG CGGTGCCCGG CGCCACATAC CAGGCCCGCG TTCGCTCCGT TGACATCCTG
CCCACCACCT CTGCCCGGGG CGGCGTGGGA TACCGGGTGC GGCTGTCGCT CGGCCCGGGC
CGGTCGGCCG AGGCGGAGGC GGCCCCGACA CCCCGTCCGG GCATGAACGC GGTGGTCCGC
CTCCAGGCGA GGGAGGCCGT TGACGCGGTC ACCGTTCCCG CCTCTGCGGT CTTCACCGCC
GACGGGCGGG ACGTGGTGTG GGTGGTGCGC GAGGGCCGGG CCGAGCGCGC GTCGGTGACC
GTCGGCGTCC AGGGCCAGGA GCTGGTGCAG ATCGTCCGGG GAGTGCGGGC CGGTGACCGG
GTCGTGGTCC GCGGCACCGA CCAGGTCCGC GACGGCCAGG AGTTGGGGTG A
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| Protein sequence | MSSIWLRREG QERYRARSMG RVRRTGSPRL PAAPRLLIAG LAVVVLTATT AAACDREQTP
VALAAAGRSS VVETIDAPAT VIARSAATLT APADGTLASL RVQPGQRVKR GQVLAVIDSP
PAQERLRQAK EALAAARRAS RGGGGDLAGG LRGTDRAADE TYEAARAAAG KISDPELREA
LLRQVREAQR RYERAAHAAD RAVRAVQRGV NDLRAAVAAL ATAQRLQAQQ AYDLATAAVD
ALTLRAPVAG IVQPGGPATG GGVSSDALAG LLAGGAPVGV DPGALGPAPP PGVDVAVGAG
GLVAAGTPVL TIVDTSQLGL LAEVDETDIL LVRAGLAATV ELDAVPGATY QARVRSVDIL
PTTSARGGVG YRVRLSLGPG RSAEAEAAPT PRPGMNAVVR LQAREAVDAV TVPASAVFTA
DGRDVVWVVR EGRAERASVT VGVQGQELVQ IVRGVRAGDR VVVRGTDQVR DGQELG
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