Gene Sare_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0374 
Symbol 
ID5704425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp435807 
End bp436670 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content72% 
IMG OID641269899 
Productaminotransferase class IV 
Protein accessionYP_001535294 
Protein GI159036041 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.122606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGG CGAGGATCGC GGTACTCGGG CACGGCCAGG TGCCGGTCAC GGAACCGGTG 
CTGCGCGGCG ACGACCTGGG CGTCCTGCAC GGCGACGGCC TCTTCGAGAC GATGCACCTG
CGGGCGGGCC GGCCCTGGTT GCGGGAAGCA CACCTGGGTC GGATGAGAAG GGCGGCGCAG
GCGGTGGAAC TGGCCCTACC ACCGACCGGA GCTCTGGTGG CGTTGCTCGA TGAAATCAGC
GACGGCTGGC CCATCGACGT CGAGGGGGCG CTGCGGCTGG TCTGTACCCG AGGCGCCGAG
GGCGGCGGAC CACCAACCAC CTACGCCACG CTCGCCCCGG TACCGCCGTC GGCCCGGGCC
GCGCGCCGGG ACGGGATCAC CGTGGCGACG TTGCCGCTGG GCGTGCCGGC CCGCGCCCGC
GCCGGCCTGG ACTGGTTGCC CACCGGCAAC AAAACCACGT CGTACGCGGT GAACAACGCC
GCCCGTCGGT GGGCATCCCG CAGCGGTGTC ACCGACGCGC TCTGGATCTC CACCGACGGG
TACGTCCTGG AAGGGCCAAC CGCCAACGTC CTATGGCTTG CCGCCGGTGT GCTAGGCACC
GTGCCCGCCA CCACCGGCAT CCTGCCCGGC ACCACCGCCG CCTGGCTGCT GGCCAACGCC
GACCAGGTGG GGCTGGCCGC GGAGGAACGG CTGGCCACCC CCGCCGAACT GCACACCGCC
GACGCCATCT GGTTCAGCTC GTCCGTCCGG GGGCTGGTCG AGGTCCGTGC CCTCGACGGC
GTGAGGCGAC CGCGCTCGGC ATACACGAAG CGGTTACAGG CCCTACTCGG CTTCCCCGTC
CCGCCCGACG AACAGCCCGG ATGA
 
Protein sequence
MVTARIAVLG HGQVPVTEPV LRGDDLGVLH GDGLFETMHL RAGRPWLREA HLGRMRRAAQ 
AVELALPPTG ALVALLDEIS DGWPIDVEGA LRLVCTRGAE GGGPPTTYAT LAPVPPSARA
ARRDGITVAT LPLGVPARAR AGLDWLPTGN KTTSYAVNNA ARRWASRSGV TDALWISTDG
YVLEGPTANV LWLAAGVLGT VPATTGILPG TTAAWLLANA DQVGLAAEER LATPAELHTA
DAIWFSSSVR GLVEVRALDG VRRPRSAYTK RLQALLGFPV PPDEQPG