Gene Sare_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0322 
Symbol 
ID5703617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp359707 
End bp361170 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content69% 
IMG OID641269848 
Producthypothetical protein 
Protein accessionYP_001535243 
Protein GI159035990 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.084246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000224903 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCCGTT CCGCCGTCGG GCCGTGGTTC CCGTCGGGTG GTGACAGTGG GCATCGGGTG 
ACAGAGTTCC CCACGGGATT GGGCCAACGG CGTATCCTGT CCGACCTGAC CGGTGCGGCC
GGAACGCTTC GTCGCCAGGA GGTGCGCTTG AGCCGTTTCG AGCGGATACG TGGACAGTTC
CGCCGTGCGT ACGAGTCGTT GCGGTCGCGG CGGGAATCGG CGGGCCTGCG CGCCGGGACG
CCCGGCAGCG CGGCGTGGGT CGTGCCCGAT CCGACGCCGT CCGCACCGCA ACCGCCACCG
GCCAGTGCGG CGCCATCCGC GCAGCCGGTC GGCGTGGAGG CGTCCGCGCC GCTGCACAGC
TCCACGTCCA GCCGGGACGA CGCCGACGTT CCGCATGCGC TACGGGTCGG TGCCGCCTGG
TCCTGGCGGC TGCTCGCGAT CGGGATCGTC GCCTGGGCTC TGTTGAAGAT CGTGGGACAG
ATCCGGATCG TGATCATCCC GTTGGCCATC GCGCTGTTGC TGTCGGCGCT GCTGGCCCCG
GCTGTCGGCT GGCTGTTCCG GGCTCGGTTC CCGCGATCGC TGGCGACCGC CGTGGTGCTG
GTGGGCGGGC TGGCCGCGGT GGTCGGCACG CTGACCCTGG TGGTGAACGA GTTCATTCAG
GGTGTGCCGG AGTTGAGCGA GAAGTCCTCC CAGGGCGTAC GCCAGATCCA GGACTGGCTG
AGAACCGGCC CGCTGCACCT CGACGACCGG CAGTTGGACA ACTACATCAA CGAGGCCGAG
AAGTGGATCA ATGACAACAC CGCTGGGCTG ACCAGCGGGG CGCTCTCCAC CGCGGCCACC
CTGGCCGAGG TGCTGACCGG CACGATCCTG GTGCTCTTCG CGACGTTCTT CTTCCTTCGT
GACGGCGGCC GGATCTGGCG CTTCCTGGTC CGGCTGCTTC CGGTCAACGC CCGCTGGAAG
GTCGACGACG CCGGCCGGGC GTCCTGGCAG ACGCTTGGCG CATACGTGCG CGCCACCGTG
CTGGTCGCCT TCATCGACGC GCTTGGCATC GGCATCTTCC TGGTGATCTT CGAGATCCCG
TTCGCGTTTC CGCTCGCCGC GTTGGTCTTC CTCGCGTCGT TCATCCCGAT CGTCGGCGCG
ACGCTGTCCG GCGGGGTCGC GGTGCTCGTC GCCCTGGTGG ACAGCGGACC GATCACCGCG
TTGATCATCC TGGGTGTGGT GATCGGTGTG CAGCAGCTCG AGGGGCACGT GCTCCAGCCA
TTGATCATGG GGCGGGCGGT GGCCATCCAT CCGCTCGCGG TGATCGTCGG TATCGCCGCT
GGGGTGGTCC TCGCCGGGGT CACCGGGGCG CTGATCGCGG TGCCGTTGAT CGCGGTGCTC
AACACGGCCG TCCGCCGCCT CGCCGCCCGT TCCGTCCCGG AGACACCATC CGACGCCGTC
GTTGTCGTGA GCAAGGACCA CTGA
 
Protein sequence
MSRSAVGPWF PSGGDSGHRV TEFPTGLGQR RILSDLTGAA GTLRRQEVRL SRFERIRGQF 
RRAYESLRSR RESAGLRAGT PGSAAWVVPD PTPSAPQPPP ASAAPSAQPV GVEASAPLHS
STSSRDDADV PHALRVGAAW SWRLLAIGIV AWALLKIVGQ IRIVIIPLAI ALLLSALLAP
AVGWLFRARF PRSLATAVVL VGGLAAVVGT LTLVVNEFIQ GVPELSEKSS QGVRQIQDWL
RTGPLHLDDR QLDNYINEAE KWINDNTAGL TSGALSTAAT LAEVLTGTIL VLFATFFFLR
DGGRIWRFLV RLLPVNARWK VDDAGRASWQ TLGAYVRATV LVAFIDALGI GIFLVIFEIP
FAFPLAALVF LASFIPIVGA TLSGGVAVLV ALVDSGPITA LIILGVVIGV QQLEGHVLQP
LIMGRAVAIH PLAVIVGIAA GVVLAGVTGA LIAVPLIAVL NTAVRRLAAR SVPETPSDAV
VVVSKDH