Gene Sare_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0160 
Symbol 
ID5706567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp172429 
End bp173184 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID641269686 
Productputative lipoprotein 
Protein accessionYP_001535086 
Protein GI159035833 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000155251 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGCAG CCGCGCATAC CCAGCCCGGC TCCGGCGCCC GGTTCGAGTG GGGGCTGGCG 
GGGGCGGCTG AACTCAGCCG GGTCTGCGCG GTGCTGGTGG TGGTGGACGT GCTCTCGTTC
ACCACCGCCG TCGAGGTGGC GGTGGGCCGG GGCACGCGGG TGCACCCCTT CCCCTGGGGA
GAGCAGGCCG CCGAGTACGC CCGTCGAATC GGTGCCGTGG CCGCCGTGGG CCGCCGTAGC
GTCGTGCCGG AGCAGCCGTG GTCACTTTCC CCGGCGGCGC TGGCCGCCGC TCCGGCCGTC
CGCGAGCTGG TTCTGCCGTC GCCCAACGGC TCGGCCATCA GCGCGGCGGC GAGTGCCACC
GGATTGCCGG TGGTCGCGGC GTGCCTGCGC AACGCCCGCG CCGTCGGCCG CTGGCTGCAC
CGGCAGGGGT ACGGCACGAC GCACGCCCCG ATCGGGGTCG TGGCTGCCGG TGAACGCTGG
CCGGACACGT CGTTGCGTCC GGCGGTGGAG GACCAACTCG GCGCGGCCTA CGTGCTGGAT
GCGCTCTCCA GGGTGCCGGG TGGGCTCTCC GTCGAGGCAG CGTTGGCGCT CGCCGCGCTG
GCCAGTACCC CGGACGTCCC GGCGGCCGTC CGGGGCAGTG TCTCTGGTCG GGAGCTCGCC
GAAGGGGGCT TCGCCGCGGA CGTAGAGATG GCCGTGCAGG TCAACGTCTC AGACGTGGTG
CCGGTGCTGC GCAACGATGT GTTCTCCGCC GCCTGA
 
Protein sequence
MTAAAHTQPG SGARFEWGLA GAAELSRVCA VLVVVDVLSF TTAVEVAVGR GTRVHPFPWG 
EQAAEYARRI GAVAAVGRRS VVPEQPWSLS PAALAAAPAV RELVLPSPNG SAISAAASAT
GLPVVAACLR NARAVGRWLH RQGYGTTHAP IGVVAAGERW PDTSLRPAVE DQLGAAYVLD
ALSRVPGGLS VEAALALAAL ASTPDVPAAV RGSVSGRELA EGGFAADVEM AVQVNVSDVV
PVLRNDVFSA A