Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0119 |
Symbol | |
ID | 5707047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 132850 |
End bp | 133350 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269645 |
Product | TrkA domain-containing protein |
Protein accession | YP_001535045 |
Protein GI | 159035792 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000259945 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCGAGTAC GTGTCGAACA GACTGCCCTT CCGGGGATCG GCGTCCGCCA CGATCTGATG ACGGAATCCG GGCGACGACT CGGGGTGGTC TCCCACCGCA ACGGCCGGCG AGACCTTGTC CTCTACGATC CGGACGACCC CGACGCCTGC CAGGCCGACA TCCCACTCAC CGACGACGAG GCCGAGGCGC TCGCCGACAT CCTCGGCGCG TCGCTGCTGC TGGGTCAGCT GTCCGGGCTG CGGGAGCAGG CCGCCGGCCT GCTGACCGAG CAGGTCGCCA TTACGGCGGG CTCGTCGTAC GTCGGTCGCA AACTCGGCGA CACGAAGGCG CGTACCCGCA CGGGCGCCTC GATCGTGGCG GTGCTTCGCC AGGGTGAGGT GATCGTCTCC CCAGACCCCT CATTCCGCTT CGTGGCCGGT GACGTGGTGG TCGTGGTCGG GACTCGACAG GGTCTCGACG GCGTGACGGC CATCCTCGCC GACGGCGATC CGGACGGCTG A
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Protein sequence | MRVRVEQTAL PGIGVRHDLM TESGRRLGVV SHRNGRRDLV LYDPDDPDAC QADIPLTDDE AEALADILGA SLLLGQLSGL REQAAGLLTE QVAITAGSSY VGRKLGDTKA RTRTGASIVA VLRQGEVIVS PDPSFRFVAG DVVVVVGTRQ GLDGVTAILA DGDPDG
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