| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3592 |
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| Symbol | |
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| ID | 5713824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3783102 |
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| End bp | 3788285 |
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| Gene Length | 5184 bp |
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| Protein Length | 1727 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269522 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534926 |
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| Protein GI | 159046132 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CTTATGAGTT TACGGCATTT TCCGAGGACG ATCTTGTCCG GCAGGGCACT
ATCGGAAAGG GTCTGGGTGT CGGCGACAAG TTCGTCATGC CCGCAGGGGC GACTTACACC
ATCTCCACCA CGGATGACGA CAACAAGCTA TCCGGCGACA AGGACGATGA TGCCACGGAT
TCCACGGGCC AGTATGCGGT CGTGAACGGT GTCGAGGTTC CCCACAAACA GGTCTACATC
GAAAAATATT ACGTGCTCAA AGGCTCGGAC GGCAAGACCT ACAAGCTCGC CGAGATCGAG
ATCGAGGATT ACAAGGCTCC CGGCCAGGGC GATGATTTCT TCACCTTCAT CGGGGACGTC
CCCCCGGCCG GTGTCGAGCT GAAGGTCAAG GACGACAGCG GCAGCAAGGG CATCGAATAC
GCCAAACTGG GCGCGGGCCC TCTGGAAGGC GATACCGGCG GCAAGACCAC CTTCGTGATC
GAAGCCGAAG ACATGAACGA TAACGGCTTC CGCACGGTGC ATGGAGATCA GGCCTCCGGC
GGCGAACTGG TGAAGCTGGA GGGGCACGAG GGTCGGCTGT CGACCCATTT CGACGGCCCC
TCGGCCACCT ATGATCTGAC GCTCTTTGCC CAGGACGAAT GCGACGGGGA ATCCCGGATC
AAGGTGTTCA TCAACGGCGT GCTGGTCGAG AGCTTCAAGC TGGACAACGA CAATGACGGC
GGCGGCAGCG ACAATGGCGG CTTCAGCGCC TTCACCATCG AAGGTCTGCA CATCCCCCAG
GGCGCCAAGA TCGAGATCAA GGCCGAGCGT GACGACGGTG AATGGGTGCG GATCGACAAG
ATCGAGCTGA CCACCGACGA CTCGGCCCCG GCCAACACCG CGCCGGTCTT CGACAACCTG
CCCGACAACG GCATCCTGCA TGTGGATGAG AACGAAACCG AGATCTTCAA CATCGACAGC
ACCGATGCCG AGGGCGACAG CTTCACCTAC AGCATCGTGG GCGGGCGCGA CGGCGCGATG
TTCGAGATCG ACCCCCACAC GGGCGAACTG AGCTTCAAGA CCGCCAAGGA TTTCGAGAAT
CCGACCTCCG GCGGCAACAA CAACACCTAT GACGTGACCG TGGCCGTCAC CGACGAGAAC
GGCAACGCGA CGACCAAGGA CCTGTGGGTC AAGGTCAAGG ACGTGGACGA GCCGAACCCG
ACATGCATCG TGATCGAAGC CGAGGACATG CATCTTTCGG GTTACTCCGT CGAGCATAAT
GGCGACGCCC ATGGCGGGGC CAACATCAAG CTCGCCGAAC ATTGCGGCGT GGCGGAGACC
GTGTTCTCGG GGCCCTCGGG CACCTATGAC CTGAGTGTGT TCTCGATGGA CGAGAACGAT
GGCAACGGCG CGATCGACGT GTTCGTGAAC GGTCACTACG TGGACACGAT CTGGCTCGAC
CAGGGCAATG ACGGGCAAGG CGGCGCGAAT TCCGGTTCGA CCTTCTCCGA AGATGTCTTC
CAGGACCTGA TGTTGAACAC GGGCGACGTG ATCAGCCTCG TGGGCTACAT GGATGGCGGC
GAGTTCGCGC GGATCGACAA GATCGAGCTG TGCCAGGACG GCAAGACCTG CCCGCCGGAT
TTCCTGAAGC TCGACTTCTC GGGTCTGACC AGGGGCACCA CCGTTTCGAA CCAGTTCGAG
GGCGTGACCA TCACCGCCCA GAAGGCGGGC GACGGGGCCG GATCGCCCAA CGACGCGATG
ATCTTCGACA GCAACAATCC GACCGGGGGC GATCACGACC TGGGTTATAA CGGGCTGGGC
AACATCCTGA TCATCTCCGA GGACAATGAC GCGTCCGATC CCGACGACAA TGCCCATGGC
GGCGTCATCA CCTTCGACTT CGACGCGCCT TCGGACCTGC AGAACATCCG TCTGCTTGAC
ATCGAGGAGA GCGGCGGGAC GATCAAGCTG TTCGACGCGG ATGGTACCCT GATCAAGACC
GTGGGCATCC CGGCGGCGGG CGACAACTCC AACCAGCTGA TCGATCTGGA TGCGGCGGAT
GTCGGGTCCA TGCAGATCCA TCTGGTGGGC TCCGGCGCGG TCGATGACCT GTGCTGGAAG
CCGGGCGAAC CGGCACCGGA GCCGGCCTCC ATCGCCGGGC GCTATTTCTG CGACGAGAAC
GACAATGACG TGGATGATGG CGAGCCGGGC GTCGCGGGGG CGACGGTCGA GTTGCTGGAT
GCGGCCGGGA ACGTGGTCGC GACCACGCAG ACCGACGACA CGGGCGGTTA CAGCTTCACC
GGGCTGGACG CGGGCACCTA TGCGGTGCGC TTCGCCCCGG ACGCAACCGG CAAGACCTTC
GTGGCGCAGG ATGTGGGCAA CGACGCCGAT GACAGCGATG TCGATCCGAC CACCGGGACC
ACCGGGCCGA TCACGTTGAT GGCGGGCGAG GACAAGACCG ACGTGGATGC CGGGGTCGAG
GATCCGGGTA CGGCGTCGGT GGGCGACACC GTATGGTTCG ATGCGAATGG GAACGGCCTG
CTGGATGGTG GCGAGAATGG CGTGTCCGGT GTGAGCGTCA CCCTGACCGG GGCTGGCGCC
GATGGCGTTC TGGGCACGGC GGATGACACC AGTGTCACGG ATGTGACCGA CGGCAACGGC
GAATACCTCT TCGAGGGGCT CGATGCCGGG TCCTACAAGG TGACCTTCGA TGCCTCTACT
ACGGGGGGGC TTGTCTTCAC GACCGAAGGT GCGGCGGCGG ACGATGCGGT CGATGGCGAC
AGCGACGCGG ACGCGACCAC GGGCATGACC GAGGCGTTCG AGCTGAGCAT CGGCGAGGCC
GAGCGCGACA TCGACGCGGG TCTGGTCGAT CCGGGCACGG CGACCCTTGG CGGGCGCTAT
TTCTGCGACG ACGACAAGGA CGGGCTGGAG GACAGCGGCG AGCCGGGTCT TGTCGGTCTG
ACCGTCGAGC TGCTGGATGC GGCGGGTAAC GTGGTGGATG ACACCACCAC CGGGGCGGAC
GGGTCGTACC TGTTCACCGG GCTGGAGGCA GGTACCTATT CGGTGCGGTT CCAGGCCGAT
CCCGATGGCA AGGAGTTCGT GGCCCAGAAT GTCGGCAGTG ACGACACCGT GGACAGCGAC
GTCGACCCCA GCACGGGTGT TTCCGATCCG GTCGTCGTCG GCGTGGGTGA GGACGTGCGC
GACGTGGATG CGGGCGTGGC AGATCCGGGT ACGGCGGCCA TTGCCGGGCG CCTGTTCTGC
GACGAGAACG ACGACTCGGT CGACAATAAC GAGCCGGGCG TCAGTGGCGT CGAGGTGCAG
CTGCTGAACG CCGCGGGGGC CGTGATTGCC ACCGCGACCA CGGCAACCGA CGGCTCCTAT
GAGTTCACTG GGCTGAACGC CGGGGATTAC TCGGTGCGCT TCCCGACCGA GGTGGATGGC
AAGGTCCTCG TGGACAGCAA TGTCGGCGGC GATGACACCA TCGACAGCGA CGCGGACCAG
GGCACGGGCG AGACCGGAAC CATCACCCTG GCCATCGGCG AGCGGTCGGA AGACAACGAC
GCCGGGATCG AGGATCCGGG CACGGCATCC CTGGCGGGTC GCTATTTCTG CGACGAGAAC
GACAACGATC TCGACGACAA CGAGCCGGGC ATCGCGAATG CGCGGGTCGT GCTGCTCACC
GCGGCGGGGG CCTTCGTGGC CGAGACGGTG ACCGCGGCGG ATGGCTCTTA CGAGTTCACC
GGTCTCGCGG CGGGGGACTA CAAGGTGTCC TTCGCCCCGG ATGTGCTGGG CAAGGTCTTC
GTGGCGCAGG ATGCCGGTGA CGATGCCATC GACAGCGACG TGGATCCGAA CACCGGCGAG
ACCGGCGTGA TCTCGGTGGC CATCGGTGAC GCGATCACCG ACGTGGATGC CGGGGTCGAA
GACCCGGGCA CCGCGTCCCT GGGCGACAAG GTCTTCCTCG ACGCCAACGG CAACGGCGTG
CAGGACGCGG GCGAGGCCGG TGTGGCCGAT GTCACCGTGC TGCTGCTCGA CGAGACCGGT
GCGGTGATCG GGACCACCGA GACCGACGAT CTGGGCATGT ACAGCTTCGG CGGCCTGGAT
GCTGGCACCT ACGCGGTCCA GTTCGTGGAG CCGGACGGGT TCGACTTCAC CACGCCGAAT
GTCGGGGGCG ATGACACCGC CGACAGCGAT GCGGAGGCCA GTGGCATCAC CCAGCAGGTC
ACTTTGGCGA TCGGCGAGAA CAACCCGACC CTCGACGCGG GCCTCGTGGT CGAGAACGGC
GATCCGACCC CCATGGACGA CATGGGCAAG ATCTGCGCCA ACGAGCTTCT GACCCTCGAT
GTCCTGGCCA ACGACACCGA TCCCGATGGC GACAGCCTGA CGATCACCGA GATCAACGGC
AACGAGATCA TCGACGGTCA GACGCTGGAG ATCGACGGTG TGTTCGTGAC CCTGAACGGC
GGGTCCCTGA CCTTCGACGG GGAAGCGGCC TTCGAGGCGC TCGACATCGG CGAAGAGGCA
GACGTGACCT ACAGCTATAC CGTGACAGAC GGGAATGGCG GCTTCGCCCA GGCGGATGTG
GATGTCACCT TCTGCGGGAC GGCGGAGGAT CTTGCGGACA TCGCACTCAG CTTGCCCGTG
CAGGTAGAAT ACCAGATCAT CGACGGCTAC AACCTCGGGA ACAGCGACGC CTATACTGTG
CAGCTGACGA GCACAGATGC GCGCCTCGAT GGGCTCATCA CCGAGGCGGC ATACTGCGTC
AGCGCGTTCG ATCCGGCAGC CGCAGGACCG GACTTTGCGA CGGCCCCGGT TCTCGGCGGG
AACCTGTTTG TGGCTGATGC AGCTCTGCTG CCGGACAATG TTCTGGACGG TCAGGTTGGG
ATTAATGGTC AAAGCGCCGA GGAAAATCTC GATCTGGTCA ACTGGATCCT GAACCAGGAC
TTCGAGAGCC AAGGTTTTAC AGACGCCGAG GTTCAGGCAG CGATCTGGGG CCTGACCGAT
AGCATTGATT TCATCCCTGG CATCTTCGGT GACCTTGAGG ATGTTCGCGA GATCGTTGCC
CTCGCAGAAG CGAACGGGGA AGGCTTTGAA GCAGGCGCTG GAGATGTGGT CGGTCTGATC
ATCGATCCGA ACCCGGCGAC AAGCACAAAC TCACAGCCGT TCATCATCGG AGTGGAGTTC
GACAATATCG ACTGCCTCTG CTGA
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| Protein sequence | MTTTYEFTAF SEDDLVRQGT IGKGLGVGDK FVMPAGATYT ISTTDDDNKL SGDKDDDATD
STGQYAVVNG VEVPHKQVYI EKYYVLKGSD GKTYKLAEIE IEDYKAPGQG DDFFTFIGDV
PPAGVELKVK DDSGSKGIEY AKLGAGPLEG DTGGKTTFVI EAEDMNDNGF RTVHGDQASG
GELVKLEGHE GRLSTHFDGP SATYDLTLFA QDECDGESRI KVFINGVLVE SFKLDNDNDG
GGSDNGGFSA FTIEGLHIPQ GAKIEIKAER DDGEWVRIDK IELTTDDSAP ANTAPVFDNL
PDNGILHVDE NETEIFNIDS TDAEGDSFTY SIVGGRDGAM FEIDPHTGEL SFKTAKDFEN
PTSGGNNNTY DVTVAVTDEN GNATTKDLWV KVKDVDEPNP TCIVIEAEDM HLSGYSVEHN
GDAHGGANIK LAEHCGVAET VFSGPSGTYD LSVFSMDEND GNGAIDVFVN GHYVDTIWLD
QGNDGQGGAN SGSTFSEDVF QDLMLNTGDV ISLVGYMDGG EFARIDKIEL CQDGKTCPPD
FLKLDFSGLT RGTTVSNQFE GVTITAQKAG DGAGSPNDAM IFDSNNPTGG DHDLGYNGLG
NILIISEDND ASDPDDNAHG GVITFDFDAP SDLQNIRLLD IEESGGTIKL FDADGTLIKT
VGIPAAGDNS NQLIDLDAAD VGSMQIHLVG SGAVDDLCWK PGEPAPEPAS IAGRYFCDEN
DNDVDDGEPG VAGATVELLD AAGNVVATTQ TDDTGGYSFT GLDAGTYAVR FAPDATGKTF
VAQDVGNDAD DSDVDPTTGT TGPITLMAGE DKTDVDAGVE DPGTASVGDT VWFDANGNGL
LDGGENGVSG VSVTLTGAGA DGVLGTADDT SVTDVTDGNG EYLFEGLDAG SYKVTFDAST
TGGLVFTTEG AAADDAVDGD SDADATTGMT EAFELSIGEA ERDIDAGLVD PGTATLGGRY
FCDDDKDGLE DSGEPGLVGL TVELLDAAGN VVDDTTTGAD GSYLFTGLEA GTYSVRFQAD
PDGKEFVAQN VGSDDTVDSD VDPSTGVSDP VVVGVGEDVR DVDAGVADPG TAAIAGRLFC
DENDDSVDNN EPGVSGVEVQ LLNAAGAVIA TATTATDGSY EFTGLNAGDY SVRFPTEVDG
KVLVDSNVGG DDTIDSDADQ GTGETGTITL AIGERSEDND AGIEDPGTAS LAGRYFCDEN
DNDLDDNEPG IANARVVLLT AAGAFVAETV TAADGSYEFT GLAAGDYKVS FAPDVLGKVF
VAQDAGDDAI DSDVDPNTGE TGVISVAIGD AITDVDAGVE DPGTASLGDK VFLDANGNGV
QDAGEAGVAD VTVLLLDETG AVIGTTETDD LGMYSFGGLD AGTYAVQFVE PDGFDFTTPN
VGGDDTADSD AEASGITQQV TLAIGENNPT LDAGLVVENG DPTPMDDMGK ICANELLTLD
VLANDTDPDG DSLTITEING NEIIDGQTLE IDGVFVTLNG GSLTFDGEAA FEALDIGEEA
DVTYSYTVTD GNGGFAQADV DVTFCGTAED LADIALSLPV QVEYQIIDGY NLGNSDAYTV
QLTSTDARLD GLITEAAYCV SAFDPAAAGP DFATAPVLGG NLFVADAALL PDNVLDGQVG
INGQSAEENL DLVNWILNQD FESQGFTDAE VQAAIWGLTD SIDFIPGIFG DLEDVREIVA
LAEANGEGFE AGAGDVVGLI IDPNPATSTN SQPFIIGVEF DNIDCLC
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