| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3591 |
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| Symbol | |
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| ID | 5713823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3781025 |
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| End bp | 3782716 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269521 |
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| Product | CAAX amino terminal protease family protein |
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| Protein accession | YP_001534925 |
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| Protein GI | 159046131 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03008] CAAX prenyl protease-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCACGGG GCCGTTCCAT TTTGGCCCCT GTCCCGTCCG CTTTGCCAGA GATAGATCCC
GCCATGAGCA CCTTTTCCGA GACACCGCAG ACCAGATCCA CGCAGCGCCT CGCCTGGGGT
GTGGCGGGCA GCCTCCTGGT GGTGGAGTTG TTGGTGATTT CCCTGCTCTA CCAGCACAAT
TTCGAGTTTA CCTGCCGCGA CCTTGCTCCG GACGGGTTTT GTGCCTTTGC CAGCCGGATC
GTGCCCCGCA CCCTCGGGTT GCTGGCGGCT TTCGGCGTCT TCGCCATGGC TCACGGCGCC
CTGGTGCAGG ACACCCTGCG TGTGCCCGGC CCGATCCGCA GCGGCGTAAG CCTGAGCCTG
GCGGGGTTCG CGCTGGCGCT GGCGCCGTGG TTCTTCCTGA GCGACGCCGC CAGCCCGGCG
CTGGTCTTCG CGGGCGGTGC GGGGTGGCTT GTGGGCGCGG CGCTGGCCGG GATTGGCGCG
GCCCTGATCC TCGCGCCCTG GCCCGCCTGG CGCGGGCTGA TCGCGCAGAA GGGCGTCCTG
CTCGCCACGC TGCTCGCGGC CGGCCTCGCC CTGCCGGAGC TGTCGGATCT GATCCAACCC
CTGTGGCGCG CGGACTGGGT GACGGAGATC ACCTTCCAGG CGGTCCTGTG GGTCTTGAAC
GCTGTGGGCT ATGGCACGGA GGCCTACCCC GAGACCAAGA TCATCGGCAT CCTCGGCGCA
ACGGAAGCGG AGAATTTCTT CGTCGCGGTG GGGCCGCAAT GCTCCGGCGT GGAAGGCTTC
GCGCTGATCT CGGTGTTCCT GACGGTCTAC ATGCTGCTCT TCCGGCGGGA TCTGGCCTTC
CCCCATGCGC TGCTGCTGTT CCCGATCGGG ATTGTGCTGA GCTGGAGCTT CAACGTGGTG
CGGATCGCGG CACTCCTGAG CCTCGGATAC GAGGTGTCAC CGGATCTGGC CATCGGCGGG
TTCCACAGCC ATGCGGGCTG GCTCGCCTTC ACCACGCTAT CCGTGGGGCT GATCCTGGTG
GCGCGGCATG TGGCGTTCTT CAACAGGGCC GAGGCGGTTG CCACCGCGCC CGCGCCGCTG
CCGCCGTTCT TCGAGGATCC GGTGGCCGCC AAGGTGCTGC CCTTCGCGAT CTTCATGGTG
TCGGCGCTGC TGGCGTCGAC CTTTTCCGAG ACACCCAGCC TGCTCTACCC GTTCCGGGCG
CTGGCCATGG CGGCGGCACT TGCGCTGTTC TGGTCCGTGC TGCGCGCGCT GCCCTGGCGG
CTCGACGGGC TGGCGGTCGG ATCCGGGCTG GCCATCGGGG TGCTTTGGAT CGTCACCGGT
CCGGAGGCGG GGAACGGGCC GCCGCCTTTC GGCGCGCTGA CCGGCGGGAT GCTGGCGCTG
TGGATCACCG CCCGGGTGAT CGGGACGAGC CTGCTGGTGC CGGTGATCGA GGAGCTTCTG
TTCCGCGGCT ACCTGCTGGA GAAGCTCGCG CCCGCCGGCA AGGGGCTGCG AATGGCGCTT
GCGGTGGTGA TCAGTGCGGG GCTTTTCGCG GTGCTGCATG ACCGCTGGAT CGCGGCGGGG
CTGGCCGGGC TGGTCTTCGG CGCGCTGGTC TACCGGTCAG GCAATGTCAC CGACGCCATC
GTCAGCCACG GGGCTGCGAA CGCCTCCATC GCGGCCTGGG CATTGGCGAC GGGGGCCTGG
CACATCATCT GA
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| Protein sequence | MPRGRSILAP VPSALPEIDP AMSTFSETPQ TRSTQRLAWG VAGSLLVVEL LVISLLYQHN
FEFTCRDLAP DGFCAFASRI VPRTLGLLAA FGVFAMAHGA LVQDTLRVPG PIRSGVSLSL
AGFALALAPW FFLSDAASPA LVFAGGAGWL VGAALAGIGA ALILAPWPAW RGLIAQKGVL
LATLLAAGLA LPELSDLIQP LWRADWVTEI TFQAVLWVLN AVGYGTEAYP ETKIIGILGA
TEAENFFVAV GPQCSGVEGF ALISVFLTVY MLLFRRDLAF PHALLLFPIG IVLSWSFNVV
RIAALLSLGY EVSPDLAIGG FHSHAGWLAF TTLSVGLILV ARHVAFFNRA EAVATAPAPL
PPFFEDPVAA KVLPFAIFMV SALLASTFSE TPSLLYPFRA LAMAAALALF WSVLRALPWR
LDGLAVGSGL AIGVLWIVTG PEAGNGPPPF GALTGGMLAL WITARVIGTS LLVPVIEELL
FRGYLLEKLA PAGKGLRMAL AVVISAGLFA VLHDRWIAAG LAGLVFGALV YRSGNVTDAI
VSHGAANASI AAWALATGAW HII
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