| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3559 |
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| Symbol | dnaQ2 |
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| ID | 5713790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3744249 |
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| End bp | 3745706 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269488 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_001534893 |
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| Protein GI | 159046099 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGGAA CTCTGAGTTT ACGGCTGCGT GTCTTTTTGT TTTTCGCGTT TCTGGCGGCG
GGTGGGATTC TGGCGGTGTC CGGTGCGCTG GTGCTGGGGT ACCGGCAGCT GGGCGATGCC
GCGGCGCTCT CGGCCTTCGT GACCAGCGGG GCGGTGGCGG GGTTCGCGAT CCTGGCCTTG
GTGACCTGGG TCTGGATGCT GTTCGATGAA AACGTCGCCA AGGCCCTGGA ATCTCTGGCC
ACGGACATGC GCGCCCGGGC CCATGCGGAT ATCGAGCGCG ACCTCGATCA GAACAAGGCG
AAATACCTCG GCGACCTTGC CCCCGCGGCG GCGGCGGTCA CGGCGAACCT GAGTGACATG
AAAAACAGTC TGGCCCAGGC GGTGATGCGC GAGACCACCC TGCTGGCGGC GGAGAAGAAC
CATCTCGAAG CGGTGCTGAA CGATCTGCCC ACGGGCGTTG TGCTGTGCAA TGCCCAGCAC
CAGGTGGTGT TCTACAACGG TCGGGCGCGG GACCTGTTGC GGCCACTCGG GGGTATCGGG
CTCGACCGGT GCCTGGCCTC GGTGCTGGAT GCCGCGCCGG TGGAGGCGGC CTATGCGCAA
CTGCTGGCCC AGCCGCGCGA AAGCTGCGCG GACATGCGGC TGGAGGTGAA TGAGGGCAAG
CTGCGGCTCG GCGTGGGGAT GCGGCTGGTG GAGCCGCTGC CCGACAGTGC GCTGCAGCCG
GGCTATATCC TGACCCTGCG CGAGGCGCCG ATGGTCGATA CGGCCTGCGC CACGCCGATC
CTGATGCCGC GGGAGACCGC CTTCGATTTC GACCTGCTCC ATGCGCGCCC GTCCCAGGAC
GTGATGGACT GCAAGCTCGG CGATCTGAAA TACGTGATCT TCGACACCGA GACCACGGGG
CTGCTGCCCG AGCGCGGCGA CGAGGTCTGC CAGATCGCCG CTTGCCGGGT GGTGAACGGC
AAGATGGTCA AGACCGAGAT GTTCGACACC CTGGTCAATC CGGGGCGGCC GATCCCGCTG
TCGGCGACGA ATATCCACGG GATCACCGAT GCCATGGTCG CGGATGCGCC GGATTTCCTG
ACCGCGGGCC GGGCGTTTCA CGGCTTTGCC GATGGCGCGG TGCTGATCGC CCATAACGCG
CCCTTCGACA TGGCGTTCTT CTATCGCAAG CAGGCCGAGA TCGGGGCGCG GTTCGATCAT
CCGGTGCTGG ACACGGTGCT GTTGTCGGCG GTGATCTACG GTCAGACCGA GCAGCATTCG
CTGGACGCGC TGGCCGAGCG GCTGAACGTG ACCATCCCCG AAGAGGCGCG GCACACCGCA
CTCGGCGATG CCCTGGCCAC GACGGAGGTG TTCCTCAAGC TGCTCCCGAT GTTGCAGGCC
AAGGGGATCG AGACCTTCGG CGACCTTCTG GCCCAGACCA AGAAGCACGC ACGGCTTCTG
GAGGACCTCA ACGCCTGA
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| Protein sequence | MLGTLSLRLR VFLFFAFLAA GGILAVSGAL VLGYRQLGDA AALSAFVTSG AVAGFAILAL
VTWVWMLFDE NVAKALESLA TDMRARAHAD IERDLDQNKA KYLGDLAPAA AAVTANLSDM
KNSLAQAVMR ETTLLAAEKN HLEAVLNDLP TGVVLCNAQH QVVFYNGRAR DLLRPLGGIG
LDRCLASVLD AAPVEAAYAQ LLAQPRESCA DMRLEVNEGK LRLGVGMRLV EPLPDSALQP
GYILTLREAP MVDTACATPI LMPRETAFDF DLLHARPSQD VMDCKLGDLK YVIFDTETTG
LLPERGDEVC QIAACRVVNG KMVKTEMFDT LVNPGRPIPL SATNIHGITD AMVADAPDFL
TAGRAFHGFA DGAVLIAHNA PFDMAFFYRK QAEIGARFDH PVLDTVLLSA VIYGQTEQHS
LDALAERLNV TIPEEARHTA LGDALATTEV FLKLLPMLQA KGIETFGDLL AQTKKHARLL
EDLNA
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