| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3548 |
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| Symbol | |
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| ID | 5713779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3729973 |
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| End bp | 3731778 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269477 |
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| Product | ATPase |
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| Protein accession | YP_001534882 |
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| Protein GI | 159046088 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.915993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC CCGACACCCA GTCTCCTGCC CCCGCGGACA AGCCCCGGCG CGAGCCGATG
TTCACCCCCG AGGACAAGGC CAACATCGCC TGGTTCTGGC GCGGCTACCT GCGCGAGAAG
CTGCCCTGGC TGATCGTGGT CTTCGGTATG GTCATCGCCC AGGGCTTCGT CTACCAGCAG
TTCCTCCGCC TGACCGAAAG CGGCCTGCGC GTCATCTTCG ACAGCGGCAC CCTGCGCGAT
CTGGTGGTGA TCTGTGCCGC GGTGTTCGGC GTCTTCGCGT TTCGCGGCGT GATGAGCTAC
CTGATCCCCC GGGTCAGCGT CTGGATCGCC GCCGATGCGG TGGCCAAGCT CCGCCGGGAG
CTGATCCACC ACCTGATGGA ACTGGATCTC GCCTTTTTCG AACACACGCC CCCCGCCGCC
ATGATCCAGA AACTCGTGGG CCAGGTCGAA GGTCTGGGCA ATTTCGTCGG CCAGACCACG
GTGAAGGCCG GGCGCGACAT CGCCACCGTG GTGATCGTGT CGATCTATCT CGCCTACCAG
CAGCCCCTGC TCTTCGCGAG CGCGGCCATC GTCTTCCCGG TGATCATCCT GACCATGCAG
CTGGTGTCGC GAAAGGTGAA ACTGGTCCAG GCCCAGACCG AGAACGCCAT GCGCGACTAC
ATCTCGACCA TCGACGAGAC CATGTCCGGC ATGCGCACGG TCAAGATCGC GGGTCAGGAA
GAGGTTGAAG AGGACCGGCT GGTCAAATCC ACCAGCCGCC TGCGCCGCCT GACCATCCGC
CGCAACGCCG CCCAAGCGGT GATCCTGCCC TGCATCGATT TCGCCGCGGC CTTTGTCTAC
ATGCTGGTGA TCGGCGGCGG CGGCTACATG GTGATCAGCC CCGCCTTCGA CGTGGACGGG
GCCGCGATCA TCGCCTTCCT GATCGGGCTG GTGCTGATTT TCGACCCGGG CCGCCGCATC
GCGCAATTCG TCGTCTCGCT CCAGGGGGCA TTGGTGCAAC TGCGCCTCGT GCGCGGGCTC
TATGACGAAC GCGCGGGCAT CGTGGATGCC CCCGACGCGG TGTCCGAATT CGACACCGGC
GCGGACCTGA CCCTCGACAA CGTGACCTTC GGCTACGAGC CCGACCGCCC GCTCTTCCGC
GACCTGTCGC TCACCTTCGG CGGCGGGCAG GTCACCGCCA TCGTCGGGCC CACCGGCTCG
GGCAAGACCA CGATCCTCAG CCTGCTGGGC CGCCTCTACG ACCCGATCGG CGGCACGGTT
CGCATCGGCG ACATCCCCGT GAACAAGATC CGCATCTCCG ACCTGCGGCA GGCGTTCTCC
GTGGTCGCCC AGGACATCGT GATCTTCAAC AGCTCGATCC TCGACAACAT CCGCTACGTG
AACCCCGACG CCACCGATGC CGAGGTCCGC GCCGCCGCCG AGGCCGCCGA ACTTGCCGAT
GTCATCGCCG AGCGCGGCGA CCTGCCGGTC GGCCCCAAGG GCGCGCAGCT CTCCGGCGGC
CAGAAGCAGC GCATCGCCAT CGCCCGCGCC TTCCTGCGCG ACGCCCCGAT CATCCTGCTG
GACGAGGCGA CCTCCGCCCT CGACCAGAAA ACCGAGGACA AGGTCAAGCG CGCCCTCGGA
CGGCTCGCCC GGGGCAAGAC CACCATCATG GTCGCGCATC GGCTGTCATC GGTGATCGAC
GCCGACCGGA TCTACGTGCT GGAAACCGGC GCGCTGGTCG AACAGGGCAC CCATGCGGAA
CTGCTCGCCA AAAACGGGCT CTATGCCCAG CTGTTCGACA GCCAGAAGCA AAGCTACGGC
AACTAA
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| Protein sequence | MTAPDTQSPA PADKPRREPM FTPEDKANIA WFWRGYLREK LPWLIVVFGM VIAQGFVYQQ
FLRLTESGLR VIFDSGTLRD LVVICAAVFG VFAFRGVMSY LIPRVSVWIA ADAVAKLRRE
LIHHLMELDL AFFEHTPPAA MIQKLVGQVE GLGNFVGQTT VKAGRDIATV VIVSIYLAYQ
QPLLFASAAI VFPVIILTMQ LVSRKVKLVQ AQTENAMRDY ISTIDETMSG MRTVKIAGQE
EVEEDRLVKS TSRLRRLTIR RNAAQAVILP CIDFAAAFVY MLVIGGGGYM VISPAFDVDG
AAIIAFLIGL VLIFDPGRRI AQFVVSLQGA LVQLRLVRGL YDERAGIVDA PDAVSEFDTG
ADLTLDNVTF GYEPDRPLFR DLSLTFGGGQ VTAIVGPTGS GKTTILSLLG RLYDPIGGTV
RIGDIPVNKI RISDLRQAFS VVAQDIVIFN SSILDNIRYV NPDATDAEVR AAAEAAELAD
VIAERGDLPV GPKGAQLSGG QKQRIAIARA FLRDAPIILL DEATSALDQK TEDKVKRALG
RLARGKTTIM VAHRLSSVID ADRIYVLETG ALVEQGTHAE LLAKNGLYAQ LFDSQKQSYG
N
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