| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3532 |
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| Symbol | ppaA |
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| ID | 5713763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3712527 |
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| End bp | 3713387 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641269461 |
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| Product | regulatory protein PpaA |
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| Protein accession | YP_001534866 |
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| Protein GI | 159046072 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.359008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC CGGACAACCT GCAAGATCCC ATAGACACCC CGGGGCGGAC CGGGGCTGGC
GTGGAAGATC TGCATCACTC ACATGGATCC GGCCTGCCCG GCTCGAACAT TCACCTCTCG
CCCGGTGAGG TCGAGCGACT CGCCGCGAAG GCACTGCAGG TTCTTGCCGA GACACCCGAA
GGTGCCCGGC AGGACGCGCC GCTGGCGCAG CTCTTTGCGC TGACCGAGGC CTATATCGCC
TTCGACGAGG TGGCCCGGCA CGAGATCCTG GCCCGTATCA TGAAACGCGG CGTGACCGCG
AATGATGTGA TCGAGGCTGT CGTTCCCGCC ACCGCGCGCT ATATGGGTGA GTTGTGGTCG
ACGGATAAGC TGAGCTTCGC GGATGTCACA ATCGGCACCG CCCGGCTGCA GGAAACGGTC
CGCAACATCG GCACCCGCCG CATCGAAACG CGGGACACCG ACGCGGAAGG CCCGGCGATC
ATGCTGATCG TGCCGCGCAT CGAACAACAT ACTCTGGGTG TGTTTGTGGT AGCCGAGCAG
TTTCGGCGGC TCGGCGTTCG GGTCCACATG ACGCTTGGAA ACAATCAGGC CGAGATCCTG
CGCCTGGTGC ATCTGAACAA CTTCGCACTT GTCGGTGTCA CCGCCTCGTG TCGCAGAACA
CTTGCATCGG TTCGCGATTT GGTGAAAACA ATCCGGACTG GCGTGCCGCG TATCACACCC
ATCGTGATAG GTGGCCCGGT TACAGATCTA GGCCTCGACA TCATCGCAAT GACCGGCGCC
GACTTTGTAG CCGGGAGCGC CGAGGAGGCA TTACGGCTTT GCAAGATCGA AACGACGCAA
CAACCAAGAC TTGAATCGTA A
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| Protein sequence | MSTPDNLQDP IDTPGRTGAG VEDLHHSHGS GLPGSNIHLS PGEVERLAAK ALQVLAETPE
GARQDAPLAQ LFALTEAYIA FDEVARHEIL ARIMKRGVTA NDVIEAVVPA TARYMGELWS
TDKLSFADVT IGTARLQETV RNIGTRRIET RDTDAEGPAI MLIVPRIEQH TLGVFVVAEQ
FRRLGVRVHM TLGNNQAEIL RLVHLNNFAL VGVTASCRRT LASVRDLVKT IRTGVPRITP
IVIGGPVTDL GLDIIAMTGA DFVAGSAEEA LRLCKIETTQ QPRLES
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