| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3514 |
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| Symbol | crtE |
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| ID | 5713745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3693641 |
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| End bp | 3694519 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269443 |
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| Product | geranylgeranyl pyrophosphate synthetase |
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| Protein accession | YP_001534848 |
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| Protein GI | 159046054 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC AGACGCGCAT TGAAACCGCC CTCGACATCG CCCTGATCCG CAGTCGCGCA
GGCTCCTGCC CGCCGAAGCT GGCCTCGGCC CTCGAATACG CGGTCAAGCC CGGGGGCGCG
CGAATCCGCC CGACCATCTG TCTCAACGTG GCCCGCGCCT GTGGCGACGA TGCACCCGGC
CTGACCGACG CCGCCTGCGC CGCGATCGAG CTGATACATT GCGGCAGCCT GGTGCATGAC
GACCTGCCCG CCTTCGACAA TGCCGATGTC CGGCGCGGCA AGCCGACCGT CCACAAGGCC
TGGTCCGAAC CGCTCGCGGT GCTGACCGGC GACACCCTGA TCATCATGGC ATTCGAGCAG
ATCGCGCTCG CCGCCCGGTC CGACGCCCTG CGCGCCGCGA CCCTGACGCT GGAACTGGCC
CGCTACTCCG GCATGCCCCA CGGCATCTGC GCCGGCCAGG CATGGGAGAG CGAGGCGCAG
GTCGACCTTT CGGCCTATCA CCGGGCCAAG ACCGGCGCGC TCTTTACCGC CGCGACCCGG
ATGGGGGCCG CCGCCGCCGG GGCCGACCCC GAGGCCTGGA CCGAACTGGG CGCCCGCATC
GGCGAGGCGT TCCAGGTGGC CGACGATCTG CGCGACGCGC TTTATGACGA GGAAACCCTG
GGCAAACCCG CCGGGCAGGA CGTGGTCAAC GCCCGTCCCA ACGCGGTCTC CGAACTGGGC
GTGCAGGGCG CGATCAAGCG GCTCGACGAC ATCCTGTCGG GCGCGATTTC CTCGATCCCC
TCCTGCCCCG GCGAGGCCGC GCTCTGCGAG ATGGTGCGCA AGACCGCCGA GCGGCTGACG
CCGGTGATAC CGAACCTGGC GAGCGTGCGG ACCGCCTGA
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| Protein sequence | MTPQTRIETA LDIALIRSRA GSCPPKLASA LEYAVKPGGA RIRPTICLNV ARACGDDAPG
LTDAACAAIE LIHCGSLVHD DLPAFDNADV RRGKPTVHKA WSEPLAVLTG DTLIIMAFEQ
IALAARSDAL RAATLTLELA RYSGMPHGIC AGQAWESEAQ VDLSAYHRAK TGALFTAATR
MGAAAAGADP EAWTELGARI GEAFQVADDL RDALYDEETL GKPAGQDVVN ARPNAVSELG
VQGAIKRLDD ILSGAISSIP SCPGEAALCE MVRKTAERLT PVIPNLASVR TA
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