Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3445 |
Symbol | |
ID | 5712503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3628823 |
End bp | 3629488 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641269374 |
Product | import inner membrane translocase |
Protein accession | YP_001534779 |
Protein GI | 159045985 |
COG category | [S] Function unknown |
COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCA ACATGCTCCA AATTCTTGTA CTGCTTGGGG TCGCCGTTTT CCTGATCCTG CGCCTGCGCA GCGTGCTTGG CACGCGCGAG GGCTTCGAAA AGAAACCTGT CCCGCTGGAC GGGCCGGAAC GTGACGTCAC GCCGCGTCGT GATTTCGAAG TGATCGAAGG CGGCCCGGAT ACGGACATCA CTGATCACGT TCCCGATGGC AGCGACAGCG CCAAAGCGCT CGCCGCCATG AAGATGGCGG AGCCGGGCTT CAACGTGACT GAATTCCTCG GCGGAGCAAA AGGCGCCTAC GAGTGGATCC TCATGTCCTT CGAAAACGGC GATATGGACG ACGTCCAGGG CTTCCTGTCC GAAGAGCTGT CCGAAGCGTT TTCGGAGGTG ATCGAGCAGC GCAATGAACA GGGCCTGACT GTCGAGGCCG AGTTCGTCGG TGTGCGCGAG ACTACGCTCG TGGAAGCAGC GTTCGACCGC GATACTCGAG AGGGTGAAGT GACCGTGCGG TTCGTGGGCG AGCTGACCTT TGTTGTGCGG AATGCCGAAG GCGAGATCGT CGAAGGCGAT CCGACGGAGA TTAAGCGTCA GAAGGACGTT TGGACCTTCG CGCGGGTCAT GGGGTCGGAT GATCCCAACT GGCGGCTTGT CGCAACCGGG GAATGA
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Protein sequence | MNSNMLQILV LLGVAVFLIL RLRSVLGTRE GFEKKPVPLD GPERDVTPRR DFEVIEGGPD TDITDHVPDG SDSAKALAAM KMAEPGFNVT EFLGGAKGAY EWILMSFENG DMDDVQGFLS EELSEAFSEV IEQRNEQGLT VEAEFVGVRE TTLVEAAFDR DTREGEVTVR FVGELTFVVR NAEGEIVEGD PTEIKRQKDV WTFARVMGSD DPNWRLVATG E
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