Gene Dshi_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3445 
Symbol 
ID5712503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3628823 
End bp3629488 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID641269374 
Productimport inner membrane translocase 
Protein accessionYP_001534779 
Protein GI159045985 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA ACATGCTCCA AATTCTTGTA CTGCTTGGGG TCGCCGTTTT CCTGATCCTG 
CGCCTGCGCA GCGTGCTTGG CACGCGCGAG GGCTTCGAAA AGAAACCTGT CCCGCTGGAC
GGGCCGGAAC GTGACGTCAC GCCGCGTCGT GATTTCGAAG TGATCGAAGG CGGCCCGGAT
ACGGACATCA CTGATCACGT TCCCGATGGC AGCGACAGCG CCAAAGCGCT CGCCGCCATG
AAGATGGCGG AGCCGGGCTT CAACGTGACT GAATTCCTCG GCGGAGCAAA AGGCGCCTAC
GAGTGGATCC TCATGTCCTT CGAAAACGGC GATATGGACG ACGTCCAGGG CTTCCTGTCC
GAAGAGCTGT CCGAAGCGTT TTCGGAGGTG ATCGAGCAGC GCAATGAACA GGGCCTGACT
GTCGAGGCCG AGTTCGTCGG TGTGCGCGAG ACTACGCTCG TGGAAGCAGC GTTCGACCGC
GATACTCGAG AGGGTGAAGT GACCGTGCGG TTCGTGGGCG AGCTGACCTT TGTTGTGCGG
AATGCCGAAG GCGAGATCGT CGAAGGCGAT CCGACGGAGA TTAAGCGTCA GAAGGACGTT
TGGACCTTCG CGCGGGTCAT GGGGTCGGAT GATCCCAACT GGCGGCTTGT CGCAACCGGG
GAATGA
 
Protein sequence
MNSNMLQILV LLGVAVFLIL RLRSVLGTRE GFEKKPVPLD GPERDVTPRR DFEVIEGGPD 
TDITDHVPDG SDSAKALAAM KMAEPGFNVT EFLGGAKGAY EWILMSFENG DMDDVQGFLS
EELSEAFSEV IEQRNEQGLT VEAEFVGVRE TTLVEAAFDR DTREGEVTVR FVGELTFVVR
NAEGEIVEGD PTEIKRQKDV WTFARVMGSD DPNWRLVATG E