| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3418 |
|---|
| Symbol | |
|---|
| ID | 5712476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3596399 |
|---|
| End bp | 3597907 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641269347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534752 |
|---|
| Protein GI | 159045958 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3898] Uncharacterized membrane-bound protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTGGT CACTTCTCAA GATCCTGATT TTCGTCACGC TGGTCGCGGC GCTTACCTTT
GGTGCCACCT TACTCATGGA AACGGGAGAA CAGGTGCGGA TCTCCCTCGC GTCGACGGAG
TTCACGCTGT CGCCGGTGGC GGCGGTTGTT CTGTCGCTGG TCCTGCTTGG GGCGGCCTAT
CTGCTCTTCA AGTTGGCGGG TCTGCTTTTG GCGACTTTAA AGTTCCTCAA TGGCGACGAG
ACAGCCATCT CTCGCTACTT CATGCGGAAC CGCGAGCGCA AAGGATTCGA AGCATTGGCG
CAGGGCATGA TGGCGCTGGC CTCAGGTGAA GGCCGGGTTG CAATGGCCAA GGCCGCGCGG
GCCGAACGCT ATCTCGGACG ACCGGACCTG ACACAATTGC TGACCGCGCA AGCCGCCGAG
CTGTCCGGGG ACCGCGCCAA GGCGACCGAG ACCTACAAGA AAATGCTGAC GGACGAGCGC
ACCAAGTTCG TGGGTGTGCG CGGATTGCTC CATCAGAAGC TGAGCGAGGG CGATACGGAA
ACCGCCATGG CCTTGGCGGA GAAAGCCTTT GCCCTGAAAC CGCGCAATGG CGAGGTCCAG
GATACACTGC TGCGCCTGCA GGCGGGGGAC GAGAACTGGG CGGGCGCGCG CAAGACATTG
GCGGCGAAAC TCAAATCCGG GGATCTGCCG CGTGACGTGC ACAAGCGCCG CGATGCCGTT
CTGGCCTATA GCGAGGCCGC CGACGCGGTG GAAGCAGGGA AGATGGACAA GGCAGAAGCC
CATGCCAACG AGGCGAACCG GCTGGCACCC GGTCTCGTGC CGTCTGCCGC GCTGGCCGCA
CGGATGGCCA TCCGTGCGGG CAAGCAACGG CAGGCAACCA AGCTGCTGAG GAAAGCGTGG
GAGCTGAACC CACATCCCGA ACTGGCCGCA GCATATGCCG AGATTGTCCC GGACGAGACC
GCCGCGGCAC GGATCAAGCG GTTTGAGGCC TTGGTGAAAC CGAACCCGAA CCATGACGAG
TCGCGACTGC TGATGGCGGA GCTTTTCATC GCCGCGGAGG ATTTCCCCGC CGCCCGAAAA
GCCATGGGTG ATCTCTACGA GACCAAGCCA AACGCCCGGT CGCTCACAAT AATGGCGGCA
GTAGAGCGCG GCGAAGGTTC GGACGACGCG ATCGTGCGTG CGTGGCTGGC AAAGGCAGTC
ACCGCCTCAC GCGGGCCGCA ATGGACCTGC GAGAACTGCA ACAACATCCA TGCCTCCTGG
ACGCCGGTCT GCGGCAATTG TGGTGCGTTC GACTCCCTGT CTTGGGTGGA ACCACCGGAA
TCCGAAATCG CGCTGACCAA CTCAGCTGAG ATGCTGCCAC TGATCGTCGG AGCCATCGCA
GATCAGAGCG CCAAGAAAGA CCCGGAGGAA GAGGTGATTG TGCCCGATGT CGTGGACATC
ACACCGACCG AGACCGGGGA TGATAACGTG TCAAAAGAGG ACGAAGCGCC CGCGCAGAAA
AGCGCCTGA
|
|---|
| Protein sequence | MLWSLLKILI FVTLVAALTF GATLLMETGE QVRISLASTE FTLSPVAAVV LSLVLLGAAY
LLFKLAGLLL ATLKFLNGDE TAISRYFMRN RERKGFEALA QGMMALASGE GRVAMAKAAR
AERYLGRPDL TQLLTAQAAE LSGDRAKATE TYKKMLTDER TKFVGVRGLL HQKLSEGDTE
TAMALAEKAF ALKPRNGEVQ DTLLRLQAGD ENWAGARKTL AAKLKSGDLP RDVHKRRDAV
LAYSEAADAV EAGKMDKAEA HANEANRLAP GLVPSAALAA RMAIRAGKQR QATKLLRKAW
ELNPHPELAA AYAEIVPDET AAARIKRFEA LVKPNPNHDE SRLLMAELFI AAEDFPAARK
AMGDLYETKP NARSLTIMAA VERGEGSDDA IVRAWLAKAV TASRGPQWTC ENCNNIHASW
TPVCGNCGAF DSLSWVEPPE SEIALTNSAE MLPLIVGAIA DQSAKKDPEE EVIVPDVVDI
TPTETGDDNV SKEDEAPAQK SA
|
|---|
| |