| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3403 |
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| Symbol | |
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| ID | 5712461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3580985 |
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| End bp | 3582724 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269332 |
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| Product | acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II |
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| Protein accession | YP_001534737 |
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| Protein GI | 159045943 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG AAGATGAGGG GCATAGTGGC ACGCAACTGG GTGTCGCCCC AACCAACGGG
TCATCACATG TGCTGGGTGC GCAAGAGCCG CCCCTTCTGG AGCTTACCAT TCCTGAGCTT
CTGGTGCAGA CCGCGGCCCG TTTCCCAAAC CATGTTGCCG CGATTTTCGA GGCGCAAGGG
ATCCGATGGA CCTACCGCGA CCTGATACGG GAGGTCGATG CGCTGGCCGG TGGGCTTTTG
CAGCTCGGGC TCAAGCCCGG TGACCGGGTC GGGGTCTGGG CACCCAACTG TGCCGAGTGG
TTGCTGGCGC AGTTCGCCAC GGCACGGCTG GGCATCATCT TGGTCAATGT GAACCCGGCC
TACCGGCCCT TCGAGTTGTC CTACGCCCTG AAGAAGACAG GATGCACCGC GCTGATCCTC
GCAGCACAGT TCAAGAATTC GGATTACGTC GCCATGCTGT CGGAAGTGGT CCCGGAGATT
GCGGCCTCCG ATCCTGGTGC GCTGCACGCG GCCGAATTGC CGGACCTTCG TGCCGTGATC
GTGACCGAGG CCGAGGCGCC GGACGGCATG ATCGCTTTTC CCGATCTGAT CGCCAAGGGT
CGCGCCGTTG TCGCGAAGGA TCTGGATGCA ATCACGCGCA AACTGGATTG CCACGATCCG
ATCAATATCC AGTTCACGTC CGGGACGACA GGGTTGCCCA AGGGTGCAAC GCTCACCCAT
CGGAATATTG TCAATAACGC TGCTTCGGTC ACGTCCGCCA TAAAGCTGAT AGAGCAAGAC
ATGCTCTGCA TTCCGGTGCC GTTCTATCAT TGCTTCGGGA TGGTCATGGG GACGCTCGGC
TGCGTCACCA AGGGGGCTGC GATCGTGGTC CCCGGGCCCG GGTTCGATCC AATCACTACA
TTGGACACGG TGTCGAAGCA TCGCTGTACG GCTCTCTACG GTGTGCCGAC CATGTTTGTG
GGTATGCTGG AGCATCCGCG ATTTGCGGAG TACGACCTGT CATCGCTGCG CACGGGCATC
ATGGCAGGCG CGCCCTGTCC GATCGAGATC ATGCGCCAGG TTCAATCCCG CATGCACATG
AGCGAAGTGA CCATAGCCTA TGGAATGACG GAGACATCGC CCGTGTCCTT TCAGTCCGCC
ACAGACGATC CGGTACAGAA ACGGGTGTCT TCCGTCGGTC GCATTCAGCC GCATGTGGAA
GTGAAGATCG TCGATGAGGA TAGCGTCGTC GTTCCGGTGG GTGCACAAGG TGAGCTTCTC
ACCCGCGGTT ACAGTGTCAT GCAAGGATAC TGGGACGAGC CGGACAAGAC CGCCGAGGCG
ATAGATGCCG ACGGATGGAT GCATACGGGC GATCTGGCGA CGTTGGATGT GGACGGGTTC
TGCAAGATCA CCGGACGGGT CAAGGACATG ATCGTACGCG GTGGGGAAAA CGTCTATCCG
CGTGAAATCG AAGAATTCCT CTACACCCAC CCGGCGATCA GTCAGGTTCA GGTGTTCGGC
ATCCCGGACC AGAAGTTCGG CGAGATCGTG GTGGCCTGGC TGGTGGCCAA GCCGGGGGCA
GACCCGACCG AAGCCGAGAT CCTCGACTTC TGTCGCGACA GCATCGCGCA TTTCAAGGTT
CCGGCCATGG TGCGCTTCAA GAACAGCTTG CCAATGACCG TAACGGGCAA GCCACAGAAG
TTCATCATGC GCGCGCAGAT GGTCGAGGAA CTTGGCCTCG AGGAAATCGA AACGGCGTGA
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| Protein sequence | MALEDEGHSG TQLGVAPTNG SSHVLGAQEP PLLELTIPEL LVQTAARFPN HVAAIFEAQG
IRWTYRDLIR EVDALAGGLL QLGLKPGDRV GVWAPNCAEW LLAQFATARL GIILVNVNPA
YRPFELSYAL KKTGCTALIL AAQFKNSDYV AMLSEVVPEI AASDPGALHA AELPDLRAVI
VTEAEAPDGM IAFPDLIAKG RAVVAKDLDA ITRKLDCHDP INIQFTSGTT GLPKGATLTH
RNIVNNAASV TSAIKLIEQD MLCIPVPFYH CFGMVMGTLG CVTKGAAIVV PGPGFDPITT
LDTVSKHRCT ALYGVPTMFV GMLEHPRFAE YDLSSLRTGI MAGAPCPIEI MRQVQSRMHM
SEVTIAYGMT ETSPVSFQSA TDDPVQKRVS SVGRIQPHVE VKIVDEDSVV VPVGAQGELL
TRGYSVMQGY WDEPDKTAEA IDADGWMHTG DLATLDVDGF CKITGRVKDM IVRGGENVYP
REIEEFLYTH PAISQVQVFG IPDQKFGEIV VAWLVAKPGA DPTEAEILDF CRDSIAHFKV
PAMVRFKNSL PMTVTGKPQK FIMRAQMVEE LGLEEIETA
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