| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3393 |
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| Symbol | leuB |
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| ID | 5712451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3570952 |
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| End bp | 3572025 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641269322 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001534727 |
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| Protein GI | 159045933 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTT TTTCGATTAC GGTTTTCGAC GGGGACGGTA TCGGCCCCGA GATCATGGCG
CCGACGCTAG GGCTTTTGCG CAAGCTGGCC GGGACTGCAG CGACCTATGA TCTGAACTTC
GACAGCCATC CTATGGGCGC GGGTCACTAT GCGCAAACAG GCCAGGCACT GCCACGGGCG
TCTCTAGACG CTGCGCGCGC CTCAGATGCG ATCCTGCTGT CCGCGATGGG GTTGCCTGAC
ATCCGCTATC CGGACGGCAC AGAAATCACA CCGCAGATCG ATATTCGGAT CGCCCTGGAT
CTTTATGCCG GTGTGCGTCC GGTACGGATC GTGCCGGGGC ATCCGACGCC GCTGCATGCA
CCGGGGCCTG TGGACTTCGT GTTGATCCGG GAAAGCACAG AGGGCCTGTT TCATACCAAG
GGCAAGGGCA CCGTGACCAA AGACCATGCC ACCGAGACCT TGCAGATCAC GCGCGATACA
TCTGAAAAAC TCTTTCGCTT CGCCTTCGCG CTTGCTGCAC AACGCAAGGC TTCCGGGCGA
GGGGAAGGGC GCGTCACCTG CGTGGACAAG GCCAACGTGT TCCGGGCCTT CGCGTTCTTT
CGCGAGATCT TCGATGCAGA GGCTGCGCGA CACCCGGATC TGATCGCAGA TCACGCCTAT
GTGGATGCGA TGGCGCTATG GATGGTGACC CGCCCCCAGA CATTCGACGT GATGGTCACC
GAAAACATGT TCGGTGATAT CCTCAGTGAC CTCGGCGCGG GGCTGATGGG GGGACTTGGC
CTGGCCCCCT CTGCGGATAT CGGGGACGAC AACGCGGTGT TTCAGCCCTG CCACGGGACT
GCACCCGATA TTGCCGGGCG CGGGATCGCC AACCCCTTGG CCATGATCCT CTCGGCGGCG
ATGATGTTGG ACTGGCTGGC CTTGCGCGGG CAGAATGCGG AACTTGCCAC AGATGGGCAG
CGCCTGCGCG AAGCGGTCGA AGCGGTCCTG ACGGAAGGGC GTGTGCTGAC CCGGGATCTC
GGCGGGAACG CCAGCACCGA GGAGGCTGCC GCAGCTGTGG CGGCCAAGCT ATGA
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| Protein sequence | MQSFSITVFD GDGIGPEIMA PTLGLLRKLA GTAATYDLNF DSHPMGAGHY AQTGQALPRA
SLDAARASDA ILLSAMGLPD IRYPDGTEIT PQIDIRIALD LYAGVRPVRI VPGHPTPLHA
PGPVDFVLIR ESTEGLFHTK GKGTVTKDHA TETLQITRDT SEKLFRFAFA LAAQRKASGR
GEGRVTCVDK ANVFRAFAFF REIFDAEAAR HPDLIADHAY VDAMALWMVT RPQTFDVMVT
ENMFGDILSD LGAGLMGGLG LAPSADIGDD NAVFQPCHGT APDIAGRGIA NPLAMILSAA
MMLDWLALRG QNAELATDGQ RLREAVEAVL TEGRVLTRDL GGNASTEEAA AAVAAKL
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