Gene Dshi_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3389 
Symbol 
ID5712447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3568158 
End bp3568988 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID641269318 
Productchromosome partitioning ATPase 
Protein accessionYP_001534723 
Protein GI159045929 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC TACAAGCCGC CCTGGATAAG GCACGTGAAC GTCGCGAAGG TTCCGTTCCG 
CCGTCAGGAC TGTCCTCACA ACGCCCGTCA CAACGCGCGC CGCTCGAGGA TCGGTGGAAG
GCGTTGAAAC CGATCCACAC GGATCCCAAA ATTCTGAGAA AAAACAGGGT TTTCTTCAAG
GATTCCCAAA ACAGCGAGGC CGCGAGTTTC GACGTTCTCA GGACCAAGGT TCTCCTTCAG
ATGGAGAAGA ACGGCTGGAC TCGCATGGCT GTAACCTCCG CAGGTAGCCG CGCAGGCAAA
AGCACGGTCT GCTGCAATCT TGCAAGTTCC ATCGCTCGCC AGCAATCCAT TCGAGCCATC
TTCATGGATC TCGACATGAG AAACCCGTCC ATGGCCAAGA AACTCGGCGT CGAGACTGAT
GGCACTGTTG CAGATATGAT GACCGGGAGC ATCAGCTTTG AAGAGCATGC AAGTCGGCTT
GGGCCGAATG TTGCACTCGC CATGAATGCA CGCCCCGTGA AGGATCCGTC TGATGTGTTC
CTCGACGACG CAACAGGCAA CTTCCTGCGA CGGCTCGAGC AGGAATATCA ACCGAACCTC
ATGGTATTCG ACGTGCCCCC GATTTTTGTC AGTGACGATG CGACGGCGAT TTTTTCTCAT
GTCGACTGCG TGTTGATCGT GGTCGATGCG GAACGCAGCA CGATACCGGA TCTGGACCGC
TGCGAAAAGG AAGTTGCGGA TCACGCCAAT GTACTGGGCA TGGTGCTCAA CAAATGCCGC
TTTCCAGAAG CCGGTTATGG CTATGGTTAC GGCTACGGGA AAAAGAGCTA G
 
Protein sequence
MEKLQAALDK ARERREGSVP PSGLSSQRPS QRAPLEDRWK ALKPIHTDPK ILRKNRVFFK 
DSQNSEAASF DVLRTKVLLQ MEKNGWTRMA VTSAGSRAGK STVCCNLASS IARQQSIRAI
FMDLDMRNPS MAKKLGVETD GTVADMMTGS ISFEEHASRL GPNVALAMNA RPVKDPSDVF
LDDATGNFLR RLEQEYQPNL MVFDVPPIFV SDDATAIFSH VDCVLIVVDA ERSTIPDLDR
CEKEVADHAN VLGMVLNKCR FPEAGYGYGY GYGKKS