| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3384 |
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| Symbol | epsH |
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| ID | 5712442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3560203 |
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| End bp | 3561804 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641269313 |
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| Product | transmembrane exosortase |
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| Protein accession | YP_001534718 |
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| Protein GI | 159045924 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR02914] EpsI family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGT CTACGGATTT TCTAGGTCGT GGCCCATCTG GCCTGAAAGT AAATTTTATC
GGGCTGACGT CCTTTGTGCT GCTTCTGGTG GTATCGCTGC CTTTGTTCTG GTCGGGGTTC
GTGTCCCTCG CACGGGCGTG GTCGACACCC GAGTATAGCC ATGGTCCGCT GATCCCTCTG
ATTTCGCTCT ATCTGTTCTT GCGCGAGCTG CGGGACAAGC CCGCAGCCAC ACCGGGCGAG
GCTGTGAACC GCTGGCCCGG TGTCCTTGTC ATCGGACTGG GTCTTCTGAT TGCGCTTGCT
GGAAACCTCT CCCGGATTCC GGACATCATC ACTTACGGGT TCATCATATG GACCGGCGGG
GTCGTGCTGA CGGTGTTCGG TTGGAAACAG GGTATCAGGC ACCAGCTGCC TGTGTTCCAC
CTAATCTTCA TGCTGCCGTT GCCGCAGTTC ATGTACTGGC ACATGACCAT ATTTCTGCAG
GGTATATCTT CGGTGGTTGG GGTCTGGTTC GTGCAGTTGG CGGGCGTGCC CGTGTTCCTC
GAAGGCAACA TTATCGACCT CGGGGTCTAC AAGCTGCAGG TTGCCGAGGC GTGTTCCGGT
TTGCGGTATC TCTTCCCCAT CTTGTCCTTC TCCTACCTGT TCGCGATCCT GTACCGCGGT
CCTTTCTGGC ACAAGATCGT GCTGCTGGTC ATGGCGGCAC CGCTCGCAGT GTTCATGAAC
TCCGTTCGGA TCGGGATCAT CGGCATCATG GTCAATTCCT ACGGCATCCA GCACGCCGAG
GGCTTCATGC ACTTCTTCGA GGGCTGGGTG ATCTTTGGAT CCTGCATCGC GATCCTCTTC
CTGACTGCAA TTGCCCTGCA GCGTCTGACA CCGAACCCCC TGCCGTTGAG CGAAGCGATC
GACCTTGACT TCAACGGGCT TGGAGGGATC TCCGCCCGGA TCACGCAGAT CAGCAATTCG
ACCCAGATGA TGGTGGCGAC CGGCATCACG GTGGTGTTCT CGGCCCTGCT TCTGGCGCTC
AACCCAGGCG CAGGCGCACC CGTTGAACGC GATCCATTCG CGATCTTCCC GCGCACGATA
GAAGACTGGC GGGGGGTGCA GGTGCCGCTT GACACTCAAG TCGAGCAAGT CTTGGGCGCC
GACGATTATA TAAATGCCAC TTACCAGAAC AGGGTCACGG ACACCGCGAT TAACTTCTTC
GTCGCGTTCT ATAACAACCA AACCGAAGGG AGCGGTATTC ATTCGCCGGA GGTTTGTTTG
CCCGCGGGTG GCTGGGAGGT GTTTTCCCTG GAGCCATATG AAGTCTCGTT CCCGGATACG
GAATATGGCA CGTTCGAACT GAACCGCGCC GTCATCCAGA AGGGCCTCGT GAAGCAGCTT
GTCTACTACT GGTTTGAGCA GCGCGGGAAG CGCCTGACGA ATGATTATGT GGCGAAGGCC
TACGTGGTCT ACGATGGGCT GATGCACGGT CGGACCGAGG GGGCGATGGT CCGTTTCGTC
ACCCCGATTT ACGGAGATGA AGACGAGGCT CTGGCGGATC AGCGTTTGCA AGAATTCATG
GAAGAGGCAC TGGTCAAGCT GCCGCGCTTC GTTCCCCTTT GA
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| Protein sequence | MSTSTDFLGR GPSGLKVNFI GLTSFVLLLV VSLPLFWSGF VSLARAWSTP EYSHGPLIPL
ISLYLFLREL RDKPAATPGE AVNRWPGVLV IGLGLLIALA GNLSRIPDII TYGFIIWTGG
VVLTVFGWKQ GIRHQLPVFH LIFMLPLPQF MYWHMTIFLQ GISSVVGVWF VQLAGVPVFL
EGNIIDLGVY KLQVAEACSG LRYLFPILSF SYLFAILYRG PFWHKIVLLV MAAPLAVFMN
SVRIGIIGIM VNSYGIQHAE GFMHFFEGWV IFGSCIAILF LTAIALQRLT PNPLPLSEAI
DLDFNGLGGI SARITQISNS TQMMVATGIT VVFSALLLAL NPGAGAPVER DPFAIFPRTI
EDWRGVQVPL DTQVEQVLGA DDYINATYQN RVTDTAINFF VAFYNNQTEG SGIHSPEVCL
PAGGWEVFSL EPYEVSFPDT EYGTFELNRA VIQKGLVKQL VYYWFEQRGK RLTNDYVAKA
YVVYDGLMHG RTEGAMVRFV TPIYGDEDEA LADQRLQEFM EEALVKLPRF VPL
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