| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3379 |
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| Symbol | flgE |
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| ID | 5712437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3552016 |
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| End bp | 3553320 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641269308 |
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| Product | flagellar hook protein FlgE |
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| Protein accession | YP_001534713 |
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| Protein GI | 159045919 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR01396] flagellar basal-body rod protein FlgB
[TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTT CCTCCTCTCT GAATGCGGGA GTCTCGGGGT TGAATGCCAA CGCGACCAGG
CTGGCCACGA TTTCCGACAA TATCGCGAAC TCTTCTACCT ACGGGTACAA GCGGGCCGAA
GCGGACTTTC AATCTCTCGT CATCAATGGG AACAGCAGTG GAACCTATTC TGCTGGAGGT
GTGCGGGTCA CGACGACCCG GGTCATCGAT GAACAGGGAC CCCTTGTGAC AACCAGCAAC
CCCACAGATC TTGCTGTCGG CGGGAGCGGG ATGTTGCCTG TGACAACGCT GTCCGCTCTG
GATGAGAATA CCGGCGGTTA TCCCTTGAGC CTGATGACGA CCGGGTCGTT CTCGCCCAAT
GCGGACGGAG TTCTGACCAC GGAAACAGGT ATGGTTTTGA TGGGATGGCC GGCAGCGCCC
GATGGGACCG TGCCGGAGTT TCCGCGTGAT ACCGTCGACG GTTTGGAACC GATCACCGTC
AATCTCAACC AGTTTGCCGG AGACCCGACC ACGCGGATCG ACCTGGGCGT GAACCTGCCT
GCAAGCGAAA CCGAGGCAGG ATCGTCCGGT GACTCGATCG ACCTTTCGAT CGAGTACTTC
GGAAATCTCG GAACCTCTGA AACGCTGGGC GTGACCTATA CGCCCCAGGT GCCTGCGTCC
GGAGCGTCCA ACACCTGGAC CATGACGATT ACGGACTCTG CTTCGGGTGG CGCCGTTGTT
GGCGAGTACG AACTCACTTT CGATGATAGT CGCGGCGCGG GTGGCACCCT GGCGTCCGTG
ACGGCTGTTT CCGGCGGTCC TTTCGATCCG GTGCAGGGGA CGGTTGAGAT TACCGCTGAC
GGTGGACCGG TTACAGTGAA GATCGGTAGC GTCGGGGACG AAAACGGCAT GACACAGCTG
TCTGATACGT TTGCACCGGT GTCGATCTCG AAGAATGGAT CGCCTGTTGG AAATCTCTCT
ACCGTCGAGG TGGACCCCAA CGGATTTGTT GTCGCAGTCT ATGATACCGG CTTCACGCGC
ACCATCTACC AGGTTCCCTT GGCGGATGTG CCCAATCCCA ACGGACTCCT GAGCCGGGAC
AACCAGTCCT ACATGATATC GCCCGAAAGT GGCCCGTTTT TCTTATGGAA TGCGGGCGAA
GGACCGACAG GGGATGTGAT CGGCTTTGCA CTTGAAGAAT CGGCGGCGGA TGTGGCCGGA
GAGCTGACCC GGCTGATCAC GACGCAGCGG GCGTACTCGT CCAATGCCAA GATCATCCAG
ACCGTCGACG AGATGTTGCA AGAAACCACT AACATCAAAC GTTGA
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| Protein sequence | MTISSSLNAG VSGLNANATR LATISDNIAN SSTYGYKRAE ADFQSLVING NSSGTYSAGG
VRVTTTRVID EQGPLVTTSN PTDLAVGGSG MLPVTTLSAL DENTGGYPLS LMTTGSFSPN
ADGVLTTETG MVLMGWPAAP DGTVPEFPRD TVDGLEPITV NLNQFAGDPT TRIDLGVNLP
ASETEAGSSG DSIDLSIEYF GNLGTSETLG VTYTPQVPAS GASNTWTMTI TDSASGGAVV
GEYELTFDDS RGAGGTLASV TAVSGGPFDP VQGTVEITAD GGPVTVKIGS VGDENGMTQL
SDTFAPVSIS KNGSPVGNLS TVEVDPNGFV VAVYDTGFTR TIYQVPLADV PNPNGLLSRD
NQSYMISPES GPFFLWNAGE GPTGDVIGFA LEESAADVAG ELTRLITTQR AYSSNAKIIQ
TVDEMLQETT NIKR
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