Gene Dshi_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3376 
SymbolflgI 
ID5712434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3548430 
End bp3549533 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content61% 
IMG OID641269305 
Productflagellar basal body P-ring protein 
Protein accessionYP_001534710 
Protein GI159045916 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC TTTTCCTCGC AATCTTCATG AGCCTGAACC TGGCCGCTAC TGCGATGGCG 
ACCCCGATCC GGCTCAAGGA TCTGGTGGAG TTCGATGGCG TTCGCGGGAA CGACCTGGTG
GGCTACGGGC TCGTGGTGGG TCTCAACGGC ACCGGCGACG GGATCCGCAA CGCGCCCTTC
ACCGAAGAAA TCCTCGGAAA TATCCTCGAA CGGCTTGGTG TCAACGTGTC GGGTGAGCAG
TTTCGTCCCA AGAATGTCGC CGCGGTTATC GTGACCGCTG AACTCCCGCC CTTCGCGCGT
GTCGGCAGCC AGATCGACGT CACCGTGTCC GCGATCGGTG ACGCCAAGAG CTTGCTTGGG
GGGACATTGA TCATGACCCC CATGAACGCG GCAGATGGTG AGATTTATGC AGTGGCCCAA
GGGACCATCA TCGCGGGTGG CGAGGCGGTT GCCGGTGGCA ACGAGGAAAT CGTGACCGGC
GTTCCGACCG CCGGGGTGAT CCCCGCAGGC GCGCGTGTAG AGCAGGAAGT GGACTTTGTC
TTTGGTGATC TGACCTCACT GCGGCTTGCT TTGCGGGCCC CTGATTTCAC GACAGCCGGA
CGTATCGAAA GTGCGATCAA CGAATTCTTC GACAGGCAGG TGGCCTTGAT GCTGGATTCC
GGAACGGTGG AAATCGACAT CTCCAGGACG CGGTTGCGCT CGGCAGCCCA CGCCATTGGG
CGGATCGAGA ACCTGCTGAT AGAGCCTGAA CTGCGCGCGC GGGTCGTTGT CGACCAGCGT
TCGGGCACCA TCGTGATGGG AGAAAATGTG CGGGTCTCGC GTGTCGCGGT ATCCCAAGGA
AATCTTACGC TGCGGATCGA GGATCAGCCT GTCATTGCGG TACCCAACCC ATTCTCAAGG
GGGGACACGA TTGTGGTCCC CCGGCAAGTT GTGACGATGG AAGAAGAACC GGGGATCGGG
CTCGCGGAGG TAAAGGAAGG CACAAACCTG TCCGAAGTGA TTTCGGGGTT GAACGCCTTG
GGCGTCTCGC CGCGGGATAT GATTGACATC CTCAAGAGTA TAAAGGCCGC CGGTGCGCTG
CACGCGGAGT TTGTGGTCCG CTAA
 
Protein sequence
MTRLFLAIFM SLNLAATAMA TPIRLKDLVE FDGVRGNDLV GYGLVVGLNG TGDGIRNAPF 
TEEILGNILE RLGVNVSGEQ FRPKNVAAVI VTAELPPFAR VGSQIDVTVS AIGDAKSLLG
GTLIMTPMNA ADGEIYAVAQ GTIIAGGEAV AGGNEEIVTG VPTAGVIPAG ARVEQEVDFV
FGDLTSLRLA LRAPDFTTAG RIESAINEFF DRQVALMLDS GTVEIDISRT RLRSAAHAIG
RIENLLIEPE LRARVVVDQR SGTIVMGENV RVSRVAVSQG NLTLRIEDQP VIAVPNPFSR
GDTIVVPRQV VTMEEEPGIG LAEVKEGTNL SEVISGLNAL GVSPRDMIDI LKSIKAAGAL
HAEFVVR