| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3364 |
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| Symbol | |
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| ID | 5712422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3535667 |
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| End bp | 3538003 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269293 |
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| Product | putative flagellar hook-length control protein |
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| Protein accession | YP_001534698 |
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| Protein GI | 159045904 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG CGGATCGGGT GATTGGCGCG AAGGGTGTCC GAGGTCCAGA AGAGGGGCCT
ACGCAAGATC GCCAGCCAAG CTTTCTGGAG ACCATGCGAA CCGGAGACCG GGCTGGTGCG
AAAGAGGCGT GGTCGCCACC GACGTCGGCA ACTCAACGCG GAGAAACGGA AGCTGTGGCA
CCGCAGAGAA CACGGGAAAC CGTCGGCGAG GGGCCAAGCA ACATGTTGCG CGACGCGCAA
TCAGTCGTTA GCGAGACTGA CCTCGTGCAG TCGGATCAGC CATTACGTTT GAAGGGCGCG
GAAATTCCAA CCGTACAAAG CCCGTCCGAA CCGCTGGGCC CGATCAAACA AGACGGCAGA
GTTGCCGATA CACAGGAGCG GTCGGATGGT CTATCACCTC TCATTCTCCA GAAGAATTTG
GAAGTACCGA TCAAGGTTGC GACTTCTCTC GAAGCGTCTC CCATGGCACC TGAACAGCCT
TTCCGGACCG AGGCCGTCTT ATCGGCCACA AGCTCACGCA ACGCTTTGAC AGCACTCAAC
ACTTCCGCAC AGACGCCCGC GAGTATCAGT GCAGATCCGC AAGACACAGC GACACCACCG
CCGCAACAGG CCAAGACTCA ACAAGAGATT GGTCAGATAG CACCCAAAGC CGGGGACCAG
TCCAGCACTT TTCGGATTAT GGGAGAGACC TTTTTGGGGC CCTTCGTTCC GAAAAGGGGC
GGCATGATCG CCATGGACAG CCCGTCCACC TTTGGTCCCA TCGCGACACA GGCACCAGCG
CAGCAGTCAG TAAAGAGCGA CGACACATCA AGAAGCGAAA CTGTTGATGT AACAAGTACG
GATAAAAAAC AGATCGCTAT GGGCGCTTCG ACAGAAGGTG AGGGCACGAA TACGCCTGTT
CAGACTGAGT TTAAGGTCGG TGCGATTTCG TCGCCGAAGG CACCTGACAC CCCATTGTCC
CCGGGCGAGG CCAGCTCCGG CTCTGAGCGT TCATCACTGC CTCTTTCTGA ACTCATCACA
GGTCTTTCCC CAACAGCCAA GAACGGTTCG AGCGAATCTG AGCGGCTAGT TCAGAACTCT
GGAACCGTGA TCGAACAGGG CAGTCCGAGC GAGAGGCCAT CAGCAATAGC GAACCCGGAA
ATCACTTCGG TGCCTGTGCA GGCATCCCTT CAATCGACCT CTCAAATCAG CCAGGCGGCG
AGCCTTGTTC TCGACAACCC GCCGAAGATT GCCCAGATTT TGGATCCAAA ACGGGATAGT
GTCGACCTCT CGAGGACCAC GCAGCCGGAC ACCGATGGGA TTGCTCGAGC AGGGCCCGCC
GCTGCGGCTG GTGCGATGCG CCCTGAAGCA ACCGATCCGG CCGCAGACAT GGGCCCGGAT
TTGAAGTTGC AAGTGCGCCA TTGGTCGAGC GGGCCAACAG ACCCCGACGT CGCGCCAAGA
ACGACGGCGA CCGACGCGCG ACCGCCAGGG AATTCGCCTT CCATGACACT TCCGGTGAAT
GTAGCGCCTC CCGCCGTAGC TGCGCTCCCC GCGCCCGCGA TACCCGGAAC GGGCGCAGGA
GGTGTCCCGT CGTCGGAGCC AAAGACCACC CCGCAGACTT CCAACCTCAA TATCGGCCCT
GGCATTCAGG CTGCACAGCC CCCTGCACCG CAACAGGTCG TGGAGCACGA TCGAAAGTCT
ACCAGCAGTG AAGCACCCGA GCCGCCCAAA CGCGCAAAGA ACGGGAGCCA TGCAGCCAAG
TTGCCGGAAG CGCCAACATC GCAGGTTGCA ATGGCGATCG CGCCACCCGC GGGGCAGACT
TCTTCTGAGG CCCTATCCGG CGAACTGAGC TTGTTGGGTG AGACCGATGG CGAAAGCCGC
TTCGACAGGG GCGAACGCGC AAGCGAGCGT GTGATCCCCG GACAGACCAA TGCCCGAACG
GCTGCGATCG CGGCATCGAT CGGAGCAAAC CTTCAGGCCA ACATGCCTAA GGTTACCGGT
GAAACGACGG AGATCCTTCT CGATCCGGAA GAGCTTGGGC GCGTGAGAAT GACCCTGAGT
GGCGCCGAGA ACGGTGGCAT CGTCATGTTG CAGGTCGAGC GACCGGAAAC GCTGGAATTG
ATGCGGCGGA ACATCGAACA GATGCGCGCC GAGCTGGTCG AGGCTGGCTG GGAAAATGTT
GAGTTCAGCT TCGGCCAGGA GAATAGTCCG GACCAGCACA AAGAAGCTGA AAGCGATCCT
TCGGGTTGGA CACCTCAGGA GGCAACAGTA TCGGCTGCAC CCGAACGGCT CTCGGCAATT
GAGCAACGGA CAGCGGCACT CAAAGCCGGC CTCAACGGGC TGGACATCAG GTTGTAG
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| Protein sequence | MPEADRVIGA KGVRGPEEGP TQDRQPSFLE TMRTGDRAGA KEAWSPPTSA TQRGETEAVA
PQRTRETVGE GPSNMLRDAQ SVVSETDLVQ SDQPLRLKGA EIPTVQSPSE PLGPIKQDGR
VADTQERSDG LSPLILQKNL EVPIKVATSL EASPMAPEQP FRTEAVLSAT SSRNALTALN
TSAQTPASIS ADPQDTATPP PQQAKTQQEI GQIAPKAGDQ SSTFRIMGET FLGPFVPKRG
GMIAMDSPST FGPIATQAPA QQSVKSDDTS RSETVDVTST DKKQIAMGAS TEGEGTNTPV
QTEFKVGAIS SPKAPDTPLS PGEASSGSER SSLPLSELIT GLSPTAKNGS SESERLVQNS
GTVIEQGSPS ERPSAIANPE ITSVPVQASL QSTSQISQAA SLVLDNPPKI AQILDPKRDS
VDLSRTTQPD TDGIARAGPA AAAGAMRPEA TDPAADMGPD LKLQVRHWSS GPTDPDVAPR
TTATDARPPG NSPSMTLPVN VAPPAVAALP APAIPGTGAG GVPSSEPKTT PQTSNLNIGP
GIQAAQPPAP QQVVEHDRKS TSSEAPEPPK RAKNGSHAAK LPEAPTSQVA MAIAPPAGQT
SSEALSGELS LLGETDGESR FDRGERASER VIPGQTNART AAIAASIGAN LQANMPKVTG
ETTEILLDPE ELGRVRMTLS GAENGGIVML QVERPETLEL MRRNIEQMRA ELVEAGWENV
EFSFGQENSP DQHKEAESDP SGWTPQEATV SAAPERLSAI EQRTAALKAG LNGLDIRL
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