| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3351 |
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| Symbol | |
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| ID | 5712409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3520331 |
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| End bp | 3521806 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269280 |
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| Product | putative membrane protein of unknown function |
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| Protein accession | YP_001534685 |
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| Protein GI | 159045891 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.881704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGA TCCGCTGGTT GGTTCTGGCC CTGTCGCTTG TTGCGGTCAC GTTCTCGGTG
TGGCGGCTGG AAGGGATGCG CGCAGGGATC GAGATCACCC GCGACGCGGT CGGCCCGACG
CCGGTCACGG TCTATCGCTT GCCCGATGCG GGCCCCGCCC CGGCGGTGGT GATCGCACAT
GGCTTTGCCG GGTCGATGCA GCTGATGGAG GCTTTTGCCC TGACACTGGC GCAGGCGGGC
TATGTTGCGG TGAGCTTCGA TTTCGAAGGT CACGGGCGCA ATCCGGTCCC CATGTCGGGC
GATGTCTCCC GGATCGACGG CACCACTCAG CTGCTGATGT CGGAAACCGG GCGGGTCACC
GATTACGCCC TGGCGTTGCC CGGGGTTGAC GGGCGCGTGG CGCTCTTGGG GCACTCGATG
GCGTCCGATG TGATCGTCCG GCAAACCATC GCGGACCCAC GGGTCTCGGC CACGGTGGCG
ATTTCCATGT TCAGCCAGGC AGTGAATGCC GAGCAACCGT CGAACCTGAT CGCGATCAAC
GGCGCGTGGG AGACGATGCT GCGCGAAGAG GCGCGCCGTG TCATCCGGCT CATCGACCCG
GACGCGGAGG AAGGGCAGAC CGTGCAGGCA GGCGACGTGG TGCGCCGGGC GGTGGCCTCC
CCGAATGTGG AACATGTGGG TGTGCTCTAT TCCGCCACCA GCCTGCAGGA AGCGCGGGAT
TGGCTCGACC GGAGCTATGG GCGCAATGCC GACACGGGTT TGGCAACGAC GGGCGGGTGG
ATCGTGCTAT TGCTGGCGGG GCTGGTGGGG CTGGTCTGGC CGGTGGCGGG GCTGCTGCCG
CGAGGCCCGG TCCCTGCCCT GCTGCCACGC CGGGATTTCG CGGTCGCCCT CGGCGTGGCC
AGCTTGGTAA CGCCCCTGAT CCTGTGGCCG GTGGAGATCG AGGTGCTGCC GGTTCTGGTG
GCAGATTACC TGGCGCTGCA TCTGCTGGTC TTCGGTGCGA TTGCCTGCGG CTACCTGCTG
TGGCGCGGGC ACCGACCGGG CGGCTGGCAA GTGGTGCCGG GACTGGCCCT GGCCCTTTAT
GGAACCTTCG TCTTCGGCGG GGCACTGGAC CGCTATGTCG CCTCTTTCAT GCCCCATGCC
GGACGGATCC CGATCATCGC CGCGATCGCG GTCGGGGCCG TCGCGTTCAT GCTGGCCGAT
ACCTGGCTCA GCGGCGCAGG GCGGGCGCCC CTGTGGCGCA AGGGCATGGT GAAGCTGGGC
TTCTTCGCGT CGCTGGGACT GGCGGTGGCG CTGGATTTCG AGGGCTTGTT CTTCCTGCTG
ATCATCCTGC CGGTGATCCT GCTCTATTTC GCGGTGTTCG GCACCATGGC GGGATGGGCC
GGGCGTCGCA CCGGCGCCGT GGGCAGCATC GGCGTGGGAT TGGGACTGGT TCTCGCCTGG
TCCCTTGGGG TCACTTTCCC GATGTTCGCG CTGTAA
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| Protein sequence | MSSIRWLVLA LSLVAVTFSV WRLEGMRAGI EITRDAVGPT PVTVYRLPDA GPAPAVVIAH
GFAGSMQLME AFALTLAQAG YVAVSFDFEG HGRNPVPMSG DVSRIDGTTQ LLMSETGRVT
DYALALPGVD GRVALLGHSM ASDVIVRQTI ADPRVSATVA ISMFSQAVNA EQPSNLIAIN
GAWETMLREE ARRVIRLIDP DAEEGQTVQA GDVVRRAVAS PNVEHVGVLY SATSLQEARD
WLDRSYGRNA DTGLATTGGW IVLLLAGLVG LVWPVAGLLP RGPVPALLPR RDFAVALGVA
SLVTPLILWP VEIEVLPVLV ADYLALHLLV FGAIACGYLL WRGHRPGGWQ VVPGLALALY
GTFVFGGALD RYVASFMPHA GRIPIIAAIA VGAVAFMLAD TWLSGAGRAP LWRKGMVKLG
FFASLGLAVA LDFEGLFFLL IILPVILLYF AVFGTMAGWA GRRTGAVGSI GVGLGLVLAW
SLGVTFPMFA L
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