Gene Dshi_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3285 
Symboltrx 
ID5712342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3452072 
End bp3452488 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID641269213 
Productputative thioredoxin 
Protein accessionYP_001534619 
Protein GI159045825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.342326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC GTGAGATTTT GGCCCTCGGG GCCGCATTCG TGACCGCGCC GATGGCGGCG 
CAGGCGATGG AGGGGGCGAA GGCCTATACC CCCGGCATGG TCGACGCGGC GCTGGCGCGG
GGCGAGACCG TGTTTCTCGA CTTCAAGGCA AGCTGGTGCA GCACCTGCGC GGCGCAGGGC
CGGGTGCTTT CTGCGCTGAA GGCGGAGATG CCGGACTATA CCTCCAGCAT CACCTTCATC
GACGTGGATT GGGACGAATT CAAGGACGCC GAGATCACCC GGCGGCTGGA AATTCCGCGG
CGCTCGACCC TGGTGGTGCT GAAGGGCGAT GAGGAGTTGG GGCGCATCGT GGCCGGGACC
GGCAAGGAGC AGATCAAGGC GCTGATGGAT ACGGCTCTGG CCGCCGCGAC GTCCTAG
 
Protein sequence
MNRREILALG AAFVTAPMAA QAMEGAKAYT PGMVDAALAR GETVFLDFKA SWCSTCAAQG 
RVLSALKAEM PDYTSSITFI DVDWDEFKDA EITRRLEIPR RSTLVVLKGD EELGRIVAGT
GKEQIKALMD TALAAATS