| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3273 |
|---|
| Symbol | |
|---|
| ID | 5712330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3437544 |
|---|
| End bp | 3438491 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641269201 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534607 |
|---|
| Protein GI | 159045813 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCCTCA GTTTCACCCG TTTCAAGGAC CGCATCTGGG GCGGGTTCGA CGCAAGCCTG
CGCGCGCTCG CAGGGATGCC CGGATGGGTG CAGACCCTGG CCTACGGCCC GCTGCAGGGG
CTGTTTCTCG TGGCCTATCT GCTGCCGGGC ACGCCGCTGG CGAAAACCTC GCGGGATTTC
GCAGCCCTGC TGGGCCGTCG GGATGCCTTT GCCATGTATC GGCAGTTCGC CCGGCAGTTT
GCCTTCGGAC TGCAACGGAT GGAGATGCTG CGCAGCGGCC AGGCGCAGGC GCTCGGGGCG
ATGCTGGACA TCCCGCGGGC CGATTTGATC GACCGTGCCC TGAGCGAAGG CAAGGGTGCG
GTGATCGCCA TGCCCCATTG CCATGCCTCG ATTGCCATGG TGCGCGGGCT GGCGGCCCGG
TATCCGGTCC TGATGCTCGT CCGCGAGAGC CGGGAAGGCG CCCGCGCGGA GGCGCAGCGC
AGCTACTATG ACCATCTCGG GTGCGACTGC GTCGACGTGC GCCGCACCAG CGACGCCGCG
GTCGCCCGGG TGGTGCTCAA GGCGCTTCGG CAGGGCAAGC TGGTGGTCGG TGTCGTGGAT
CGTATCCAGG CCGCGCCCCT CGCAGAGGAG CCCTATGACA AGATGCGCGA CATGGTGCGG
GTCGATGCCT TCGGTCAGCC AGTGGGCTGG ATCGGATGGC CGGTCCGGTT TGCCGCGCGG
CTCGGCAGCC CGATCCTGCC TGCGATGGTG GCGCAGACAC CGACCCGCAT CGTCCTGCAC
CTGTCTCCGC CGCGCCGCCC CGAGGACCTG CAGACCGCAA CGCAAGCGAT CGCGGACGAT
CTGGCAACCC TGATCCGGGC CCATCCGGCC GAATGGGTGT TTCTTTATGA CAAGCACTGG
CGTCAGGTGC TGGACAGGGC CCGAGCGGAC CCACCGCAAT TGACCTAG
|
|---|
| Protein sequence | MALSFTRFKD RIWGGFDASL RALAGMPGWV QTLAYGPLQG LFLVAYLLPG TPLAKTSRDF
AALLGRRDAF AMYRQFARQF AFGLQRMEML RSGQAQALGA MLDIPRADLI DRALSEGKGA
VIAMPHCHAS IAMVRGLAAR YPVLMLVRES REGARAEAQR SYYDHLGCDC VDVRRTSDAA
VARVVLKALR QGKLVVGVVD RIQAAPLAEE PYDKMRDMVR VDAFGQPVGW IGWPVRFAAR
LGSPILPAMV AQTPTRIVLH LSPPRRPEDL QTATQAIADD LATLIRAHPA EWVFLYDKHW
RQVLDRARAD PPQLT
|
|---|
| |