| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3258 |
|---|
| Symbol | flhA |
|---|
| ID | 5712315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 3422887 |
|---|
| End bp | 3424983 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641269186 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001534592 |
|---|
| Protein GI | 159045798 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAAAG AGAACGTCGT CAGCAGCCGA CACTTCCTGC AGCCCACCGT CTTCTTCGTG
ATCATGCTGC TGGGCATCAT CGTCATGATG ATCCTGCCCA TGCCCTCGAT CGTGCTCGAT
ATCGGGCTGG CGCTGTCCTT CTCGCTCTCG ATCCTGATCT TCACGGTCAC GCTCTTCATC
AACCGGCCCC TCGATTTCTC GGCCTTCCCC ACGGTGCTGC TCGCGTCGCT GATGCTGCGG
CTGTCCCTGA ACGTCTCGTC GACCAAGCTG ATCATCGGGC AGGGGCACGA GGGCACCCAT
GCTGCCGGCG GCGTGATCGA AGGCTTCGCC AATTTCGTCA TGGGCGGCAG CATCTTTCTC
GGCCTCGTGG TGTTCCTCGT GCTGCTGATC GTGAACTTCA TCGTCATCAC CAAGGGCGCC
TCGCGCATGG CCGAGGTGGG CGCCCGCTTC GCCCTCGACG GGATGCCGGG CAAACAGCTC
GCGATCGACG CCGACATGTC CGCCGGGGCC ATCGACCACG CCGAGGCGAA GCGCCGCCGC
GAAACCGAAC AGGCCGAAAC CACCTTCTTC GGCTCGCTCG ACGGGGCGTC GAAATTCGTC
AAGGGCGACG CGGTCGCGGG GCTTCTGATC ACCGCGCTGA ACCTGATCAT GGGCCTTGTG
ATCGGCATGA CCCTCCATGA CATGCCCCTG GGGGAGGCGT TTCGCACCTA CTCCATCCTG
ACCGTGGGCG ACGGGCTCGT GACCCAGATC CCCGCGGTCA TCATCTCGAT CGCGGCCGCC
CTGCTGCTGG CCAAGGGCGG CTCGGACGAA AAGGCCGACA TCGCCATCAG TGCGCAATTC
GGACGCCACC CGGCCGCGCT GGCCACGGTC GGCTTCATGA TGTTCCTCTT CGCCCTGATC
CCCGGACTGC CCTTCATCCC CTTCACACTT GGGGCGATGG TGCTCGGGGG GGCGGCGCTC
TATCTCTACC GCAAGACCCC CGACAGCCCG GAGGGGGAGG ACAAGCCCGC CGCACAAACC
GACCGCCCGC GCGAGGCGAC CATGGGCGAT ATCCTCGACG TGGACGAAAT CCACGTCACC
TTCTCGACCG ACCTTGTCTC CTCGATCCTC GACGCCGCGG GTGGCCTCGA CACCCGGATC
CAGAGCATGC GCAACCATAT CGCCAGCGAG TTCGGCGTCA TCCTGCCCGA GATCCGCCTG
ACCGACGATG CCGGCCTGCC GGATGCCAGC TACGCCATTT TCCTGCATGG CGTCGAAGAG
GCCCGCGGAC AGCTCTACCC CGATCGCATC TTGCTGCTTT TGCCCGAAGA AGGTTTCCGC
GAGCCGACCG AGTACGACGT CAAGGAGCCG GTCTACGGCG CCCCCGCCCG CTGGATCGAG
AAGTCCGAGC GCGACGAGGT TTCGCTGCTC GGCATGACCA CCGTCGCCTC GACCGAAGTT
CTGGCCACCC ACCTGCTCGA AGTGGTGAAG GGCAACCTGG CGCGGCTGAT GACGCTCAAG
GCCCTGCGCA AACTGATCGG AGAGCTGACC AACACCGCCG ACGCCGCCCG CAACGAGGCC
AATCGCCTGC TCGTCGAAGA ACTGATCCCC GACCGCGTCA CCAACGACAC GTTGATCGCG
ATCCTGCGCC TGCTGCTGGA AGAGCGGGTC TCGATCCGCA ACCTGCCCCT CATCCTCGAG
GCCATCGCCG AGGCCAAGCA GATCAGCTCC GCCATCGACG GTATCCACGA ATATGTCCGG
CAACGGCTCT CGTTTCAGAT TGTCTCCGAC CTCAAGCGCA GCGATGGCAC CATCCCCCTG
ATCCAGCTCG CCCAGGAATG GGAGCAGATC TTCGCCGCCA ACTCCATCGG CCGCGAGGAC
GGTGCCGCGG ACGTGGCCCT GCCGCCCGAT CTGTTTCAGA AGCTGATCCA GAACGCGTCC
GAAAAGGTGG TCAAGGCCAA TGAAAGCGGC GTGAACCCGG CGATCGTGAC CTCCGTCCGG
CGGCGCCGCT TCCTCTCCAC GGTGCTGGCG AGCAAGGGCT TGCAGGTGCC CGTATTGTCC
TTCGAAGAGC TCGGGAAAAC CAACCGGCCC TCCCTGGTCG GGGTGGTCTC CGCGTGA
|
|---|
| Protein sequence | MIKENVVSSR HFLQPTVFFV IMLLGIIVMM ILPMPSIVLD IGLALSFSLS ILIFTVTLFI
NRPLDFSAFP TVLLASLMLR LSLNVSSTKL IIGQGHEGTH AAGGVIEGFA NFVMGGSIFL
GLVVFLVLLI VNFIVITKGA SRMAEVGARF ALDGMPGKQL AIDADMSAGA IDHAEAKRRR
ETEQAETTFF GSLDGASKFV KGDAVAGLLI TALNLIMGLV IGMTLHDMPL GEAFRTYSIL
TVGDGLVTQI PAVIISIAAA LLLAKGGSDE KADIAISAQF GRHPAALATV GFMMFLFALI
PGLPFIPFTL GAMVLGGAAL YLYRKTPDSP EGEDKPAAQT DRPREATMGD ILDVDEIHVT
FSTDLVSSIL DAAGGLDTRI QSMRNHIASE FGVILPEIRL TDDAGLPDAS YAIFLHGVEE
ARGQLYPDRI LLLLPEEGFR EPTEYDVKEP VYGAPARWIE KSERDEVSLL GMTTVASTEV
LATHLLEVVK GNLARLMTLK ALRKLIGELT NTADAARNEA NRLLVEELIP DRVTNDTLIA
ILRLLLEERV SIRNLPLILE AIAEAKQISS AIDGIHEYVR QRLSFQIVSD LKRSDGTIPL
IQLAQEWEQI FAANSIGRED GAADVALPPD LFQKLIQNAS EKVVKANESG VNPAIVTSVR
RRRFLSTVLA SKGLQVPVLS FEELGKTNRP SLVGVVSA
|
|---|
| |