Gene Dshi_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3254 
SymbolflgH 
ID5712311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3419427 
End bp3420155 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID641269182 
Productflagellar basal body L-ring protein 
Protein accessionYP_001534588 
Protein GI159045794 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTT TTGTTCCTTT CGTCGCCTGT CTTGTCGTGC TGAGCGCGTG CGGGCGGATC 
GCAGATGTGG GTCAGGCCCC TGACTTCACG GCGTCGTCCT CGGGCAGCGA ATACCAGGCC
ATGATCTCGG CCCCGATTGC CAGTGACCGG ACGATCGACC GGGCCCCGGA GCGCGCCTCG
CTCTGGAGCG GGACGCGCAA CTCGCTGCTG GGGGACCGGC GGGCGGGTCA GAACGGCGAT
ATCCTGACCG TGGTGATCGA GATCGACGAT CGTGCCGAGA TTTCCAACAG TTCCGAACGC
TCGCGCTCGG GCAGCGAAAC CCTGGCCATC GACGATTTCT TCGGCCTGCC CCAGCGGATC
GATCCCCGGT TGCCCGAGGG GGCGAGCCTG GGATCGGCGG TCGGGGTTTC GTCGAACGGG
TCATCCTCCG GCGACGGGTC GGTCTCGCGG CGCGAGAAAC TGACCTTGCG GGTCGCGGCC
ACGGTCGTCG GCGTGATGCC GAACGGGGTG TTCGAGATCC AGGGCACCCA GGAGGTGCGC
GTCAATTTCG AACTGCGCGA GCTGATCGTG ACCGGGTTCG TGCGGCCCGA GGACATCTCG
CGGCAGAACG AGATCACCTA TGACAAGATC GCCTCGGCGC GGATCTCTTA TGCCGGACGC
GGTCAGATCA CGGACGTTCA GCAGCCGCGC TACGGCCAGC AGATCGCCGA CATCATTCTG
CCGTTCTGA
 
Protein sequence
MRIFVPFVAC LVVLSACGRI ADVGQAPDFT ASSSGSEYQA MISAPIASDR TIDRAPERAS 
LWSGTRNSLL GDRRAGQNGD ILTVVIEIDD RAEISNSSER SRSGSETLAI DDFFGLPQRI
DPRLPEGASL GSAVGVSSNG SSSGDGSVSR REKLTLRVAA TVVGVMPNGV FEIQGTQEVR
VNFELRELIV TGFVRPEDIS RQNEITYDKI ASARISYAGR GQITDVQQPR YGQQIADIIL
PF