| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3249 |
|---|
| Symbol | fliE |
|---|
| ID | 5712306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3416918 |
|---|
| End bp | 3417196 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641269177 |
|---|
| Product | flagellar hook-basal body protein FliE |
|---|
| Protein accession | YP_001534583 |
|---|
| Protein GI | 159045789 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.937877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCC GTTCCAGCAC GGCGGCACAG CTCTACACAC GTTCCAAGGA GCTGACCGCG
CCGAAACACG AAGGGCCCGA CATTGCCGGT GCGGCGCGGA GCTTTGCCGA AACGCTCCAG
AACGGCGAGG CCGTCACGCA AGCGGCGATG ACCGGCGGGG CGGATCCCCA TGCCCTGGTC
GAGGCACTAG CCCAGACCGA GCTGGCCGTG GAGACCGCGG TGACCGTGCG CAACAAGGTG
GTCGAGGCCT ACCAGGAAAT CCTGAGGATG CCGGTCTGA
|
|---|
| Protein sequence | MDIRSSTAAQ LYTRSKELTA PKHEGPDIAG AARSFAETLQ NGEAVTQAAM TGGADPHALV
EALAQTELAV ETAVTVRNKV VEAYQEILRM PV
|
|---|
| |