| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3245 |
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| Symbol | |
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| ID | 5712302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3413789 |
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| End bp | 3414574 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269173 |
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| Product | putative proteasome-type protease |
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| Protein accession | YP_001534579 |
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| Protein GI | 159045785 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.716596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC CGGAGCATGG CAGCCGGGAA CGTGAAATGA CTTATTGTGT GGGGCTGAAA
ATGGCCCGCG GCATGGTGTT CATGTCGGAT ACGCGCACCA ATGCGGGCGT CGACAACATC
TCGACCTTCC GCAAGATGGC AAGCTGGGAG CAGCCGGGCG AGCGGGTCAT CACCCTGATG
ACCGCGGGCA ACCTGGCCAC GACCCAGTCG GTGGTCAGCC TGCTGGAGGA GCGGATGAAG
GCCCCGGGGG AACGCAGCCC CTCGGTCTTC GAGGCGCCGT CGATGTTCCA GGTGGCGCGG
ATGGTCGGTG CGACCCTGCG CGAGGTGATC CAGTCGAACG CCAATACCGG CGCGCGGGCC
GACAGCACGT TCAACGCGAC GCTGCTTCTG GGTGGGCAGG TCAAGGGCAG CGCGCCGCGG
CTGTTCATGA TCTATCCGGA GGGGAATTTC ATTGAGGCCT CGGACGACAC GCCGTTCTTC
CAGATCGGGG AGACGAAATA CGGCCGGCCC ATCCTGGTGC GCGCCTTCGA TCCGGAGATG
AGTTTCGAGG ACGCGATCAA GCTCTTGCTG GTGAGTTTCG ATTCGACCAT CAAGGCGAAC
CTGTCGGTGG ATCTGCCGCT GGACGTGCAG GTGATCGAGA CCGATGCGCT GCGTCTGGGC
TATGCCGCCC GGATCACCGC CGATGACAGC TATTTCCAGA CGATTTCCAG CGGCTGGGGC
GAGGCCTTGA AGATGGCTTT CGACAGCCTG CCGAAATTCC GCATGGACGA CAGCCGGGAG
ACCTGA
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| Protein sequence | MALPEHGSRE REMTYCVGLK MARGMVFMSD TRTNAGVDNI STFRKMASWE QPGERVITLM
TAGNLATTQS VVSLLEERMK APGERSPSVF EAPSMFQVAR MVGATLREVI QSNANTGARA
DSTFNATLLL GGQVKGSAPR LFMIYPEGNF IEASDDTPFF QIGETKYGRP ILVRAFDPEM
SFEDAIKLLL VSFDSTIKAN LSVDLPLDVQ VIETDALRLG YAARITADDS YFQTISSGWG
EALKMAFDSL PKFRMDDSRE T
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