| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3244 |
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| Symbol | |
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| ID | 5712301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3412814 |
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| End bp | 3413650 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269172 |
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| Product | putative transglutaminase-like superfamily protein |
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| Protein accession | YP_001534578 |
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| Protein GI | 159045784 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTGA AGATCACCCA CAGGACGACC TACAGCTACG ACACGCCCAT CCCTTACGGG
TTGCAGCAGG TGCGTCTGAC GCCGAAGTCG CGCGATACCC AGAAGGTGCT GAACTGGACC
ATGAGCTTCG AGGGCGCCCA GCCCCAGGTG AGCTACGAGG ACGAGCACAA GAACGAGACC
AACCTGATCA GCTTCGATCC CGGGGTCACC GGGGTGACGA TCCATTGCGA GGGCGAGGTC
GATGTGACCG ACACCAGCGG CGTGACCGGC AAGCATTCGG GGTTCATGCC GTTGTGGATG
TTTTTGCGGA CCACGCCGCT GACCAAGGCC GGGCCGGGGC TGCGCAAGCT GATGCGGGAG
TTCGACGCGG GAGGCACGCC GCTGGATCAG TTGCACGGGT TGATGGCCCA TATCGCGGGC
GCGGTGGCGT ATGCCCCGGG CGAGACCCAT GTGGGCACCA CGGTCGAGGA GGCGGTCGCC
GCGGGCAAGG GGGTGTGCCA GGACCACACC CATATCTTCA TCACCGCGGC GCGCGCGCTC
GGGGTGCCGG CGCGGTATGT CTCGGGCTAT CTGATGATGG AGGACCGGGT GGAGCAGGAC
GCCACCCATG CCTGGGCCGA GGCCCATGTG GACGGGATCG GCTGGATCGG GTTCGACGTG
TCGAACGCGA TCTGCCCGGA TGCACGCTAT GTCCGGGTGG CGACGGGGCT GGATTACACC
GATGCCGCCC CGGTCTCGGG GATGCGGTTC GGGGACGGGG CCGAGCGGCT GGACGTGACC
TTGCAGGTGC AGTCCCAGGG CGCGCAGACG CAATCCCAGA GCCAGGGCCA GGCATAA
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| Protein sequence | MILKITHRTT YSYDTPIPYG LQQVRLTPKS RDTQKVLNWT MSFEGAQPQV SYEDEHKNET
NLISFDPGVT GVTIHCEGEV DVTDTSGVTG KHSGFMPLWM FLRTTPLTKA GPGLRKLMRE
FDAGGTPLDQ LHGLMAHIAG AVAYAPGETH VGTTVEEAVA AGKGVCQDHT HIFITAARAL
GVPARYVSGY LMMEDRVEQD ATHAWAEAHV DGIGWIGFDV SNAICPDARY VRVATGLDYT
DAAPVSGMRF GDGAERLDVT LQVQSQGAQT QSQSQGQA
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