| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3233 |
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| Symbol | |
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| ID | 5712290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3402060 |
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| End bp | 3402899 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269161 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001534567 |
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| Protein GI | 159045773 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.534878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGCC CCGACCCGCG CCGGACGCCC TTTGACGGCA CCACCGCGCT GGAGGTCTTG
CGCGGCGCGG TGCCCGCGGC CCGGTTCACG CCCGGCAGGG CGGCGCAGGT CGTGTGGCCC
GAGACCCCGC TGCTGCGCCG CCCCGGAGGC GCGATCGACA AGACCCTGCT GATGGGGGAG
CCGGTCACCG TGATTTCCGA GGGCGCGGGC GCGGCCTTCG TCCAGTCGGG CTGGGACGGT
TATGTGGGCT ATGCGGATCC TGCCGCGCTT GGCCCTGCCC GTGCCGCGAC CCATGTGGCG
ACCGCGCGCG GCAGCCATCT TTACACAGAG CCGGATTTCA AATCGCCGCC GCGGTTCGCG
GTCTCCCTCG GCACGGCGCA TTCCGTCACC GGGCAGACCG ACGGGTTCCT CGAGACGCCC
CACGGCTTCC TGCCGGTCCA GCACGCGGCC GCGCTGCCCA CACGCCTGCC GCCGCCCGAA
ACTGCCCGTC GGCTGCGCGG CACGCCCTAT CTCTGGGGCG GGAACAGCGG GACGGGCATC
GACTGCTCGG GCCTCGTGCA ACTGGCTTGC CGCCTTGCGG GCATTGTTGC GCCGCGCGAC
AGCGATCAGC AGGCGGCGGA GCTGGGCACG CCGCTGCCCC CCGATGCCGC CCTGCAGGCC
GGGGACCTCG TGTTCTGGAA AGGCCATGTG GGGATGATGG CCAGCGCGAC CGACCTCATC
CATGCCAACG CCCATCACAT GGCCGTGGCG CAAGAGCCGC TGTCTGAGGC CGCCGCCCGG
ATCGCCGCGA ATGAGTTCGG CGCGATCACC GACCGCCGCC GCCTGCCGGA GTGGGCCTGA
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| Protein sequence | MTGPDPRRTP FDGTTALEVL RGAVPAARFT PGRAAQVVWP ETPLLRRPGG AIDKTLLMGE
PVTVISEGAG AAFVQSGWDG YVGYADPAAL GPARAATHVA TARGSHLYTE PDFKSPPRFA
VSLGTAHSVT GQTDGFLETP HGFLPVQHAA ALPTRLPPPE TARRLRGTPY LWGGNSGTGI
DCSGLVQLAC RLAGIVAPRD SDQQAAELGT PLPPDAALQA GDLVFWKGHV GMMASATDLI
HANAHHMAVA QEPLSEAAAR IAANEFGAIT DRRRLPEWA
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