Gene Dshi_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3199 
SymbolnosX 
ID5712255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3363665 
End bp3364573 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID641269126 
Productputative nitrous-oxide reductase protein NosX 
Protein accessionYP_001534533 
Protein GI159045739 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC GTCGCAGAGT TCTGAGCATC GCCGCCGCGG CCTGCGCCTG GCCCGCCGCC 
GCCCGAACGC CCCTGCACGT GGAAACCGGT TGGGCCTTGG GTACGCAGGT TTCACTGCGG
CTGGCCCATC CCGAGGCCCC CGTGATCGCC GCCGCGGCCC TGGCGGAAAT ATCCCGCCTG
GAAGATATCT TCAGCCTCTA TCGGCCCGAC TCGGCGCTTT CCCGGCTCAA CGCCGTGGGT
CGGCTGGAGG CCCCGCCGGC GGAGCTTTTG GAATGCCTGT CGCTGGCGGG CGCGGTCTAC
CACGCCAGCG CGGGGCGTTT CGACCCGACG ATTCAGCCAC TCTGGCGGGC GCTGGCCACC
GCCGCGCAAA CGGGCCGCCC ACTGTCGAAC ACCGCTCGGC GCGCAGCGCT GGAGGTGACC
GGCTGGCCCA AGGTGACCCT CGAGGCCCGC GCGATTTCCT TGCCTTCCGG CGCGGCGCTG
ACCCTGAACG GGATCGCGCA GGGCTATGTG GCGGACCGGG TCGCGACGTT CCTTGCGGAC
CGGGGCCTGA CCAACACCCT GATCGACACC GGCGAGTTGC GCGCGCTCGG CCACGACCCG
CGGACCGGCG GCCCCTGGCC CGTGCGCTTC GCGGCGGGCG GCGACATTGG CCTCGCCCAG
CGCGCCCTTG CGACCTCGGC CCCTCTGGGC ATGACCTTCG GCGGCGATGG GGTGCAGGGC
CATATCCTCG ATCCCCGGAC CGGCAGCAGC GCGGCGTCGC CCTGGGCGGC CCTGTCGGTC
TCTTCGTCAT CGGCGGCCCT GGCTGACGCG GTCTCTACGG CCGCGTGCCT CTGTGACACC
CGCGCAGATG TGTTCGGGCT CTGCGACGCC TTCCCGGACA CGCGCCTGGA AGCCGCGCAT
CGCGCTTAG
 
Protein sequence
MLTRRRVLSI AAAACAWPAA ARTPLHVETG WALGTQVSLR LAHPEAPVIA AAALAEISRL 
EDIFSLYRPD SALSRLNAVG RLEAPPAELL ECLSLAGAVY HASAGRFDPT IQPLWRALAT
AAQTGRPLSN TARRAALEVT GWPKVTLEAR AISLPSGAAL TLNGIAQGYV ADRVATFLAD
RGLTNTLIDT GELRALGHDP RTGGPWPVRF AAGGDIGLAQ RALATSAPLG MTFGGDGVQG
HILDPRTGSS AASPWAALSV SSSSAALADA VSTAACLCDT RADVFGLCDA FPDTRLEAAH
RA