Gene Dshi_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3197 
SymbolnosY 
ID5712253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3362270 
End bp3363094 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID641269124 
Productnitrous oxide maturation protein NosY 
Protein accessionYP_001534531 
Protein GI159045737 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.606796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TCCTCGCGAC GGCAAAAACT GAACTGCGCA TCGCCATCCG CAACCGATGG 
GTGCTGATCG CGCTGATCCT TATGGCGGTG TTCTCGCTGG TCCTCGCCGC GGTGGGGTCC
GCCCCCACCA GCGGCGGGCT CGGGGTCGAC CGGCTGTCGG TGACGGTGGC GTCGCTGACT
TCGCTTTCGG TCTACCTCGT GCCGCTTCTC GCGCTGCTGA TGAGCTTCGA TGCCATCGCC
GGCGAGGTGG AGAGGGGCAC GCTGCCGCTT CTGCTGACCT ACCCGATCAC CCGGCAGGAG
GTTCTGCTGG GCAAGCTGCT GGCCCATCTC GCGGTGCTGA CCCTCGCGGT GGTCGTGGGC
TACGGTCTGG CCGCCGCGAT AGCCTTTGCC AGCGATTCCG ACGCCGGGGC GGGGCTAGTC
GCGTTGTGGC GGCTGACCTG GACCTCGGTG CTCCTGGGGG CGACCTTCCT CGGGGCGGGC
TACGGCCTTT CGGCCCTGGC GCGGCGGCCC TCCGGTGCGG CGGGGCTGGC GATCGGGCTC
TGGCTCGGGC TGGTGGTGCT TTATGATCTT GCCCTTCTGG CCGCGATCGT AGCCGATGGT
GGCGGCTGGT TCACCACCGA CGTTTTCCCC TACGCCCTGC TGGCCAACCC GGCGGATGCC
TTTCGCCTGT TCAACCTGAC CGCCTCCGGC GCCATGGCCG CGGCCAGCGG GATCGGCGGT
GCGGCCGGCA CGATCCCTGT CTGGCAATCG CTGCTACCGG TGCTGATCTG GCCGATCTGC
GCGACCGCCC TGGCCGGACT GGCCTTCCGC AAGGTGACGC CATGA
 
Protein sequence
MTRILATAKT ELRIAIRNRW VLIALILMAV FSLVLAAVGS APTSGGLGVD RLSVTVASLT 
SLSVYLVPLL ALLMSFDAIA GEVERGTLPL LLTYPITRQE VLLGKLLAHL AVLTLAVVVG
YGLAAAIAFA SDSDAGAGLV ALWRLTWTSV LLGATFLGAG YGLSALARRP SGAAGLAIGL
WLGLVVLYDL ALLAAIVADG GGWFTTDVFP YALLANPADA FRLFNLTASG AMAAASGIGG
AAGTIPVWQS LLPVLIWPIC ATALAGLAFR KVTP