Gene Dshi_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3178 
SymbolnirC 
ID5712234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3340585 
End bp3340896 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content66% 
IMG OID641269105 
Productputative cytochrome c 
Protein accessionYP_001534512 
Protein GI159045718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.733909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.809001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGGA CCGTCGCAGC GCTCTGTCTG ATCCTGTGTG CCGCGGGGCC GCTGCAGGCC 
GGCGAGACAC CGCTGGATAC CGCTGCGCTC GAAAGGCTTG TCCTGCAGGA TTGCGGGTCC
TGCCACGGGT TGACCCGAAA GGGCGGGCTT GGCCCGGACC TGCGCGCCGA GGCCCTTTCC
CATTGGGCGC CCGAAGATCT CGCTCAGATG ATCCTCGACG GTTTGCCCGG TACCGCAATG
CCCCCCTGGC GCGCGCTGAT GACCGAACGC GAAGCGGCGT GGATCGCCGA TTATCTTCTT
GCAACGGAGT AG
 
Protein sequence
MSRTVAALCL ILCAAGPLQA GETPLDTAAL ERLVLQDCGS CHGLTRKGGL GPDLRAEALS 
HWAPEDLAQM ILDGLPGTAM PPWRALMTER EAAWIADYLL ATE