| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3154 |
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| Symbol | |
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| ID | 5712210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3319882 |
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| End bp | 3320430 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269081 |
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| Product | TRAP transporter-DctQ subunit putative |
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| Protein accession | YP_001534488 |
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| Protein GI | 159045694 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA GCCTGCTGCA CATTCTGCGC CGCCTGAACC GCGGCATCGC GCTCGCCACG
GGCGTGGTGC TGATGGGCTG CGCCGCGATC GTCCTGGCGG ATATCGTGCT GCGGCAAATG
GGGTCCTCCT TCGGCGGGAC GGACGAGATC TCGGGCTACG TGATGGCCAT TGCCACCTCC
TGGGGGATGG CCTTCACCCT GCTGGAGCTG GGCCATGTGC GCATCGACAT CCTGCGCGGC
CGCGCGGGCC AGCGCGCCCG CGCCTTTTTC GACCTGTTCT CGATGCTGGT TCTGACGGGC
ACGGTGACGC TGATCGCGTA CAAGTGCTGG CCCGTGGTCG CACGGTCACT GGCCAACGAC
TCACGGGCCA ACACGCCGCT GGAAACCCCG CTGGCCTGGG TGCAGATCCC GTGGTTCGCG
GGCTGGGTGT GGTTCGCGAT TGTCGCCTGG CTGACCTTTG TCGCGGCGGC CATGCTGGTG
ATGAAGGGGC GTTTCGAGAC CGCGGATGAA GCCATCGGCT GCTTCGGGGA AGAGGATCTG
GCGAAATGA
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| Protein sequence | MEESLLHILR RLNRGIALAT GVVLMGCAAI VLADIVLRQM GSSFGGTDEI SGYVMAIATS
WGMAFTLLEL GHVRIDILRG RAGQRARAFF DLFSMLVLTG TVTLIAYKCW PVVARSLAND
SRANTPLETP LAWVQIPWFA GWVWFAIVAW LTFVAAAMLV MKGRFETADE AIGCFGEEDL
AK
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