| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3109 |
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| Symbol | |
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| ID | 5710961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3274527 |
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| End bp | 3276476 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269036 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534443 |
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| Protein GI | 159045649 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTT CCGTGATGAC AGTTTTCCTG GCGCTTGGCG TGGCCCTCAC GGCCTCGATC
GCGCGGGCGG AAGACCCGCG CGTGCCGGAC TATATCGGCA CGGCGGTGTG CGCGGATTGC
CACCAGGAGG CGTATGAGGC CTGGCAAGGC TCCCATCACG ACTTGGCCTG GACGCCGCCC
GATGCGCTGC ATGTGCTGGG CGATTTCGAC GATGCGGAAT TCGTCCATAA CGGCGTGCGC
ACGACCTTCA CCACCGAGGA CGGCGTGTTC TACATCACCT CCGACGGGCC GGATGGCAGG
TTGCAGAAAT ACCCGGTGCA CAGCGTTGCG GGGATCGCAC CGTTGCAGCA ATACCTGATC
GAGACGGAGC CGGGGAAGAT CCAGTCCTTC GACGTGGTCT GGGATATCGA GCGGGGCGCG
TGGTATCACC TCTATCCGGA TCAGGACTTG CCGGCCTCGG ACGGGTTGCA CTGGACCGGG
CCCTACAAGA ACTGGGGCGC GCGCTGCGCC GAGTGTCATG CCACGGGCTA CAAGAAGGGG
TACGACCCGG CGACGCGGAC CTACACCAGC ACCCAGGCGG AGATCGGCGT GGGATGCGAG
GCCTGCCACG GACCGGGGGA GGCCCATGTG AGTTGGGCCC TGCCGGGGGG CGATTACGAT
CCGACCCGCT GGGACCGGGT GGGCGAGACC GGGCTGACCA TGGATTTCGC GGCCGGTGCG
GAGGCGGAGA TCCAGCAATG CGCAGCCTGC CATTCCCGGC GCGAGGCGTT CGAGGAGGGC
AATCCGCTGC CCGGCACGCC TTATCACGAT GCCTATCGGC TCAGCCTCTT GCGGGACGGG
ATGTATCACC CGGACGGGCA GATCCTGGAA GAGGTCTATG TCTATGGCTC GTTCATCCAG
TCCAAGATGT ACGCCGCCGG GGTGGCCTGC ACCGATTGCC ACGATGCGCA TTCGGCGCAG
CGGCTGACCG AGACCAATGA CCTGTGCACC CAGTGCCATT CGACGGCCGG GAACCCGGAG
TTCCCGACCC TGCGGCTGGC GGAGTATGAC GACCCGTCCC ACCACTTCCA CGAGGTCGGC
AGCGAAGGGG CGCAGTGCAA GAGCTGCCAC ATGATCGAGC GCGACTACAT GGGGATCGAC
GGGCGGCGCG ACCATTCCTT CCGGGTGCCG CGCCCGGACC TGACTGTCGA GACCGGCGCG
CCCAATGCCT GCAACGATTG TCACACGGAT CGCAGCGCCG AGAAAATGGC GGCCGAGCTG
GAGGCGCGCT TTCCCGACAG CATCCATCGC GGTCCGCATT TCGCCCAGGT CTTCGCCCGC
GCCCGGATCG CGCCGCAGAG TACGGCGGAG AACATCGTGG CGCTGACCGA ATACCTCGAT
CTGCCGGGGA TCGTGCGGGC GTCGGCGCTG GAGCTGCTGC ATCCGATGGC GGGCCCGGAG
CTGGCGGATC GCATGGCGAT GGCTCTGCGC GATCCTGATC CGCTGGTGCG GGCCGCGGCG
GTGCCGATCC AACGTGCGGC ACCCGCGCCG GTTCGGGTGG AGCGCCTTGC GCCCCTGCTG
TCAGATCCGG TCCGAAGCGT GCGGATGGCG GCAGCCCGTG AATTCCTCGA TCTGAACATG
CGGGTTGTTC CGCCGCAGAC CACGCAAGCG CTCGGAGCCG CGATGTCGGA ATGGCAGTCG
TCGTTGCGGG CAAAGGCGGA TTTCCCGGAG ATCCAGATCA TCCTCGGCGG TGTCGGCTTG
ACGATGCGGA ACATGCCTGC CGCCCTGTCG GCTTTCTCCG AAGCGGTCGA CCTCGATCCG
CAGCGCGAAG AAGCCTGGTC TATCATTGTA CGCATCTATG CCGCGCTCGG GGATATGGCG
GCGGCGAGAG ATGCCGTGGA CGCAGCACTG GTTGCAAACC CCGAGAGTGT GGCGCTGCGG
GTTCTGCGGG GTGAAATCCT CCAGCAATAG
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| Protein sequence | MGFSVMTVFL ALGVALTASI ARAEDPRVPD YIGTAVCADC HQEAYEAWQG SHHDLAWTPP
DALHVLGDFD DAEFVHNGVR TTFTTEDGVF YITSDGPDGR LQKYPVHSVA GIAPLQQYLI
ETEPGKIQSF DVVWDIERGA WYHLYPDQDL PASDGLHWTG PYKNWGARCA ECHATGYKKG
YDPATRTYTS TQAEIGVGCE ACHGPGEAHV SWALPGGDYD PTRWDRVGET GLTMDFAAGA
EAEIQQCAAC HSRREAFEEG NPLPGTPYHD AYRLSLLRDG MYHPDGQILE EVYVYGSFIQ
SKMYAAGVAC TDCHDAHSAQ RLTETNDLCT QCHSTAGNPE FPTLRLAEYD DPSHHFHEVG
SEGAQCKSCH MIERDYMGID GRRDHSFRVP RPDLTVETGA PNACNDCHTD RSAEKMAAEL
EARFPDSIHR GPHFAQVFAR ARIAPQSTAE NIVALTEYLD LPGIVRASAL ELLHPMAGPE
LADRMAMALR DPDPLVRAAA VPIQRAAPAP VRVERLAPLL SDPVRSVRMA AAREFLDLNM
RVVPPQTTQA LGAAMSEWQS SLRAKADFPE IQIILGGVGL TMRNMPAALS AFSEAVDLDP
QREEAWSIIV RIYAALGDMA AARDAVDAAL VANPESVALR VLRGEILQQ
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