| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3090 |
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| Symbol | udgA |
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| ID | 5710942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3259227 |
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| End bp | 3260024 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641269017 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_001534424 |
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| Protein GI | 159045630 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.646333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAGG AGCTGGACTA TCACACCTTG CGCGCGGCGC TGGAATGGCA GGTGGAACTT
GGCGCCACCG AGGCCATCAG CGACGCGCCC GTGGACCGGA CCGTCGCGGT GGAGCCGGAG
CGCCCGAAAG CGCCCGCAGC GGCCCCCGCG GCGCCGTCCG TGGCCGCCGC CCCTGCGCCG
GACGGGCCCG AGATGGCGGT CACCGCCGCG CGCGGAGCCG CCGCGCAATC GGGCAGTCTG
GAGGCTTTGC GCGACGCGCT CGCCGCCTAT CCCCATTGCG AGCTGCGCAA GGGCGCGCGG
AACCTCGTCT TCAGCGACGG GCGGCCCGGG GCGCGGGTGA TGATCCTCGG CGAAGCGCCG
GGCCGCGACG AGGACCGGGA GGGGCGACCA TTCGTCGGGC GGGCCGGGCA GCTTTTGGAC
AAGATGCTGG CCGCGATCGG CCTGGCTCGG GACGCGCCGG ATCCAGGCCA TGCGGTCTAT
ATCACCAACA TCCTGCCCTG GCGCCCGCCC CAGAACCGCG ACCCGCGCCC CGACGAGATC
GCCATGATGA TGCCCTTCGT GCAGCGCCAT GTGACGCTGG CGGACCCGGA GATCCTCGTT
CTGATGGGCA ATATCTCCTG CCAGGCGGTG CTGGGGCGCA AGGGGATCAC CCGGCTGCGC
GGCCAATGGA CCGAGGCCAT GGACCGACCG GCCCTGCCGA TGTTCCACCC GGCCTTCCTG
CTGCGCCAGC CGGCCCAGAA ACGCGCGGCC TGGGCAGATC TGCTCGACCT TCAAGCCAGA
CTGAAAGGGA CCGAATGA
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| Protein sequence | MEQELDYHTL RAALEWQVEL GATEAISDAP VDRTVAVEPE RPKAPAAAPA APSVAAAPAP
DGPEMAVTAA RGAAAQSGSL EALRDALAAY PHCELRKGAR NLVFSDGRPG ARVMILGEAP
GRDEDREGRP FVGRAGQLLD KMLAAIGLAR DAPDPGHAVY ITNILPWRPP QNRDPRPDEI
AMMMPFVQRH VTLADPEILV LMGNISCQAV LGRKGITRLR GQWTEAMDRP ALPMFHPAFL
LRQPAQKRAA WADLLDLQAR LKGTE
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