| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3040 |
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| Symbol | dapB |
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| ID | 5710892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3209163 |
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| End bp | 3209972 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268967 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_001534374 |
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| Protein GI | 159045580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.787809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG TGCCGGGGAT CGTGGTGACA GGGGGCTCTG GCCGGATGGG TCGGATGCTG
ATCGAGACGG TGCGTGGGTC GGACGCGGCA CGGCTGGTGG GCGTGACCGA GCGGCCCGGC
CATGACTGGA TCGGTGCGGA TATCGGCGTA GCGCTGGGCG GGGCGGCGAT CGGGGTGACC
GTGACCGACG ACCCGCTGGA GGCGTTCGCG ACCGCACAGG CGGTCATCGA TTTCACCTCC
CCCGCCGCGA CCGTGGCCCA TGCGGAGCTG ACCGCCCAGG CCCGCGCGGT GCATGTCATC
GGCACTACCG GGTTTTCGCC CGCGGATCTC GCCCATCTGG AGGCGGCTGC GCGCCATGCG
GTGATCGTGC GGGCGGGGAA CATGAGCCTC GGCGTCAACC TGCTTGTGAA GCTGACCGAG
AAGGTCGCGG CGGCGCTCGA TGCGGATTAC GACATCGAGG TGATCGAGGC CCATCACCGC
CACAAGGTCG ATGCGCCTTC GGGCACGGCC CTGATGCTCG GCGAGGCGGC GGCGGCGGGC
CGGGGCGTCG CGCTGGCGGA TGTCTCCGAC CGGGGGCGCG ACGGGATCAC CGGGGAACGC
AAGCGGGGCG ATATCGGCTT TTCGGCCATC CGGGGCGGCG ACATCGTGGG CGAGCATGAT
GTGCTGTTTG CCGCCGAGGG CGAGCGGATC ACCCTGCGCC ACGTGGCGTC GGACCGCTCG
GTCTTCGCGC GCGGGGCGCT GAAGGCGGCG CTTTGGGGGC AGGACAAGGG GCCGGGCGCC
TATGACATGA TGGATGTGCT CGGTCTTTGA
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| Protein sequence | MSDVPGIVVT GGSGRMGRML IETVRGSDAA RLVGVTERPG HDWIGADIGV ALGGAAIGVT
VTDDPLEAFA TAQAVIDFTS PAATVAHAEL TAQARAVHVI GTTGFSPADL AHLEAAARHA
VIVRAGNMSL GVNLLVKLTE KVAAALDADY DIEVIEAHHR HKVDAPSGTA LMLGEAAAAG
RGVALADVSD RGRDGITGER KRGDIGFSAI RGGDIVGEHD VLFAAEGERI TLRHVASDRS
VFARGALKAA LWGQDKGPGA YDMMDVLGL
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