| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3037 |
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| Symbol | |
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| ID | 5710889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3206616 |
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| End bp | 3207824 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268964 |
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| Product | efflux transporter |
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| Protein accession | YP_001534371 |
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| Protein GI | 159045577 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.732235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.830026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCC CGTTTTCCCT GCTCAAGGAC CTGTTCTGGG TCGTGTTCTC GGTGGCCCTC
GTGGGTGGGG GCGTTCTGGG CTTCCAGTAT CTTGGCGCGA ACCGGGACGT GGTCGCGCCG
CAGCCGGTGG AGCGGCCCGT GGCGCTTGTG GCGACCGAGG TGCTGACCCC CTATGACGGC
GCCTTGCCGA TCCGGGGCGA CGGCTTCATC ACCCCGTTCC GGCAAGTGGC CCTGTCGTCC
CAGACCCAAG GCCGGATCGT GACGCTGCAT CCGGCCATCG ACGCCCGCGG GACCTTTGCC
GAGGGCGATA TCCTCGTGCG GCTCGACGAG CGCGCGGCGC AGGCCGCCCT GGCCCAGACC
GATGCCAATA TCGCCTCTAC CCAGGCGCGG CTCGATCTGG TGGTCTCGCA GCTGGCGCGG
GGCGAGACCC TGCGGGAACG GGGCATCATC TCGCAAGAGG CGCTCGATTC GCTTCTCAGC
CAGCAGTCGG AGCTGACCGC GACCCTCGAC AGCCTGCGGG CGGCGCGGGA AACCGCCCTT
GTCACCCTGG ACAATGCGCG GATCGCAGCC CCGTTTGCAG GGCGCGTGCT GCGCAAGACC
GCCGAGATCG GCGCCGTGGT CAGCCCGGGC CAGGAGATCG CGGTGCTCTA CAGCGATGGC
GCGCTGGAGG TGACCGTCCC GCTGCGCCAG GCGGATGCCG CGCTGATCCC GGGCCTGTTC
GAAGGTGCGG CGGTCCCGGC CGAGGTCCAT GCGCGTTTCG CCGGGCAGGA TGTGACCTGG
GCGGCGGAGG TCGCCCGCGT GGACGCCGCG CTCGACAGCC GGACACGGTC GCTCAACGTC
ACCGTGCGGC TCAAGGCGCA GACCGGGGCG ACCGCCGCGG GGGCGCTGCC GTCGGGCGCG
CCACCGGCGC TGATCAACGC GTTTGCCAAT GTCACCATCA GCGGGGCCGA GGTGCCGGGC
GCCTATGCGA TCCCCTCCAC CGCCCTGCGC GATGGCGGCG CGATCTGGCT CTATGACGCC
GGGGCGCTTG CCGTTGTGCC CGCCGCGTTG ATCCACGTGG ATGGCGAGCA GAGCTTCGTG
CGGCTGGGCG CGCTGCCCGC AGGGGCGGAG TTGATCACCA GCCCGCTCGA CACGGCGGTG
GCGGGCATGG CGCTGCGCCG CGCGGCGGTG ACCGAACGCA CCGCCGCCCT GACGGAGCAG
CCCCGATGA
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| Protein sequence | MSRPFSLLKD LFWVVFSVAL VGGGVLGFQY LGANRDVVAP QPVERPVALV ATEVLTPYDG
ALPIRGDGFI TPFRQVALSS QTQGRIVTLH PAIDARGTFA EGDILVRLDE RAAQAALAQT
DANIASTQAR LDLVVSQLAR GETLRERGII SQEALDSLLS QQSELTATLD SLRAARETAL
VTLDNARIAA PFAGRVLRKT AEIGAVVSPG QEIAVLYSDG ALEVTVPLRQ ADAALIPGLF
EGAAVPAEVH ARFAGQDVTW AAEVARVDAA LDSRTRSLNV TVRLKAQTGA TAAGALPSGA
PPALINAFAN VTISGAEVPG AYAIPSTALR DGGAIWLYDA GALAVVPAAL IHVDGEQSFV
RLGALPAGAE LITSPLDTAV AGMALRRAAV TERTAALTEQ PR
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