Gene Dshi_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3027 
SymbolatpF2 
ID5710879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3196549 
End bp3197109 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID641268954 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001534361 
Protein GI159045567 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.281762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TACTCCTGCC TGCCCTGCTG ACCTTCAGCG CCACACCGGC GCTGGCAGCG 
AAGGGGCCTT TCTTCTCGCT GGCGAATACC GACTTCATCG TCCTGATCTC GTTCATCGCC
TTCATCGGGG TGTTGGTCTA TTTCAAGATC CCCGGCATCC TGAGCGGCAT GCTCGACAAG
CGGGCCGAGG GCATCAAGGC CGAGTTGGAA GAGGCCAAGG CCCTGCGCGA AGAAGCGCAG
ACGCTGCTGG CCTCCTACGA GCGCAAGCAG CGCGAGGTGC AAGCCCAGGC GGATGCCATC
GTGGCTACGG CCAAGGAAGA TGCCGAGGCC GCAGCGGCTC AGGCGAAGGT CGACCTCGAA
GCTTCCATCG CACGCCGGTT GGCCACCGCC GAGGACCAGT TGGCGTCGGC TCAGGCCGCT
GCGATCAAAG AGGTCAAGGA CAAGGCCGTA ACGGTCGCGA TTGCCGCCGC TGCGGACGTG
ATCTCGTCCA AGCTGGGCAA GGCCGAGCTG AATGCGCTGA ACGCCGATGC GATCAAGGAA
GTGAAAGCCA AGCTGCACTG A
 
Protein sequence
MKKLLLPALL TFSATPALAA KGPFFSLANT DFIVLISFIA FIGVLVYFKI PGILSGMLDK 
RAEGIKAELE EAKALREEAQ TLLASYERKQ REVQAQADAI VATAKEDAEA AAAQAKVDLE
ASIARRLATA EDQLASAQAA AIKEVKDKAV TVAIAAAADV ISSKLGKAEL NALNADAIKE
VKAKLH