| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2990 |
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| Symbol | |
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| ID | 5710842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3154721 |
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| End bp | 3155620 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268917 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001534324 |
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| Protein GI | 159045530 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA CTCTCATCCG CACCTTCCTC GAAGTCGCCG CCACCGGCTC CTTCGTGAAC
GCCTCCGACC GGCTGTTCGT GACCCAATCC GCCGTGAGCC TGCGCATCCA GCGCCTCGAA
GACACGCTCG GCAAACCGCT TTTTTCCCGG TCCAAGTCGG GGGCCGAGCT GACCCCGGCC
GGCCGCGCGT TCGAGCCCTA CGCCCTGTCG CTGCTGAAGG TCTGGGAGGA AGCCCGCCAG
CAGGTCGGCG TCCCCGAGGG CTTCACCCAG TCGCTCACGC TCGGCGCGCA ATACTCCCTC
TGGCCCCGGC TCGGCTTTCC TTGGATCGAC GGTCTGCGCG CCGCCGCCCC GACCCTCAGC
CTGCGGGCGG AACTCGGGAT GCCAGACCGC CTCACCCGGT TCCTGATCGA AGGCGTGATC
CAGGCGGCCC TGGTCTACAC CCCGCACCTG CGCCCGGGCC TCGCCGCCCG CAACCTGATG
GAAGAAGATC TCGTGCTCGT CGCGTCGTGG CAGGCCGGGC TCGACGATCT GGCCACGCGC
TATGTCTTCG TCGACTGGGG GCCGGAGTTT CACCACGCCC ACACCCTCGC CCTGCCGGAG
CTGACCAATC CCGGCCTGAC CCTGGCTCTC GGAGCCATGG CCCGGGACTA CCTGCTGTCG
CGACAAGCCG CAGCCTACCT GCCAGCCCGC GCCATTGCCG CCGATCTGGA GGCCGGGCGC
CTGCACCTCG TGCCCGACGC GCCACGGTTT CCCTACCCGG TCTGGGTGGT CTGGCGCGAG
GACGTGCCCA CCCCCCTGCG CGAAACCGCC GACACAGCAC TCGACACCAT CGTCGCCCGG
GTGGACGCCA CCCAGGAAAC CGTGCTGGCG GAGTTGTCCG AGATCAGCAC CGCCCCCTGA
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| Protein sequence | MDITLIRTFL EVAATGSFVN ASDRLFVTQS AVSLRIQRLE DTLGKPLFSR SKSGAELTPA
GRAFEPYALS LLKVWEEARQ QVGVPEGFTQ SLTLGAQYSL WPRLGFPWID GLRAAAPTLS
LRAELGMPDR LTRFLIEGVI QAALVYTPHL RPGLAARNLM EEDLVLVASW QAGLDDLATR
YVFVDWGPEF HHAHTLALPE LTNPGLTLAL GAMARDYLLS RQAAAYLPAR AIAADLEAGR
LHLVPDAPRF PYPVWVVWRE DVPTPLRETA DTALDTIVAR VDATQETVLA ELSEISTAP
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