Gene Dshi_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2953 
SymbolhisG 
ID5710804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3114128 
End bp3114847 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID641268879 
ProductATP phosphoribosyltransferase catalytic subunit 
Protein accessionYP_001534287 
Protein GI159045493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.845161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0412161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA AGCTCGGCGT GCCGTCCAAG GGGCGGCTGA TGGACAAGAC CTTCGACTGG 
TTCGGCAGGC ACGGCATCAC CCTGCAGCGC ACGGGCTCGG AGCGGGAATA TGCCGGCTCG
GTCGACGGGG TCGACGGCGT GGCGCTGGTG CTCCTGTCGG CGGGCGAGAT CCCGCGCGAG
CTCGCGGCCG GACGCATCCA TCTCGGCGTG ACCGGCACCG ACCTGGTGCA GGAAAAGCTG
CCCGACTGGA TGCGCCAGGT CCGCAGCATC GCGCCCCTGG GATTCGGTCA TGCGGACCTG
ATCCTCGCGG TGCCGAAATG CTGGATCGAT GTGGAAACGC TGGACGATCT CGACGCCGTC
GCGGCCCAGT TCCGCGCCAA TCACGGCTTT CGTTTGCGCA TTGCCACCAA GTACCACCGC
CTGGTTCACA GCCACCTGAG CGCCCATGGC GTCGCCGACT ACCAACTGGT CGACAGCCAG
GGCGCCACCG AGGGCACGGT CGCCAACCTG ACCGCCGAGG CAATCGCCGA CATCACCTCG
ACGGGGGAGA CTTTGCGTGC CAATCACCTC AAGATATTGA AGGGGGAGCC TGTCCTGAAA
TCCCAGGCCA CCCTGTTTGC CTCGCGCATG GCCGACTGGG ATCCCACGGC GCGCGCCGCG
ATGCGGGCCC TGGGGGCGGC CATGGGACGG GACGACGCGA CGGACGGAGT GTTCCAATGA
 
Protein sequence
MTLKLGVPSK GRLMDKTFDW FGRHGITLQR TGSEREYAGS VDGVDGVALV LLSAGEIPRE 
LAAGRIHLGV TGTDLVQEKL PDWMRQVRSI APLGFGHADL ILAVPKCWID VETLDDLDAV
AAQFRANHGF RLRIATKYHR LVHSHLSAHG VADYQLVDSQ GATEGTVANL TAEAIADITS
TGETLRANHL KILKGEPVLK SQATLFASRM ADWDPTARAA MRALGAAMGR DDATDGVFQ