| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2937 |
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| Symbol | atpH |
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| ID | 5710788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3094257 |
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| End bp | 3094817 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268863 |
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| Product | ATP synthase delta chain |
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| Protein accession | YP_001534271 |
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| Protein GI | 159045477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.213023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0695694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGACT CAGCTTCGAT CTCCTCCGGT ATCGCTGATC GTTATGCGAC GGCGATCTTT
GAACTGGCCA AGGAAGAAAA CAACATCGGT GCGCTGGAGG CAGGGGCCGA CCTGCTGGAT
GCGGCCCTCA AGGAGAGCGC AGAGTTCCGT GATCTGATCT CGTCACCGGT CTACAGCCGC
GACGAGCAGG CCGGTGCCAT CGGCGCGATC GCCAAGAAGC TCGAACTGGC CCCCATGCTG
AGCAACGCGC TGGCGCTGAT GGCGTCCAAG CGCCGCCTGT TCGTGCTGCC GCAACTGGTG
GCGAGCCTGC GCGCGCTCAT CGCCGAGGAA AAGGGCGAGA TGACCGCGGA CGTGATCTCG
GCCCAGCCCC TGAGCAAGGC GAACCTGGAC GAGCTGACCA AGGTGCTTAG TGCGTCCGCC
GATAAAACCG TCAAAGTGAA TGCGACCGTC GATAACAGCC TTATCGGCGG TCTTGTCGTC
AAGATGGGCT CGAAGATGAT CGACACGTCG ATCCGCGCGA AGCTCAATGC ACTCCAGAAT
ACTATGAAAG AGGTCGGGTA A
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| Protein sequence | MSDSASISSG IADRYATAIF ELAKEENNIG ALEAGADLLD AALKESAEFR DLISSPVYSR
DEQAGAIGAI AKKLELAPML SNALALMASK RRLFVLPQLV ASLRALIAEE KGEMTADVIS
AQPLSKANLD ELTKVLSASA DKTVKVNATV DNSLIGGLVV KMGSKMIDTS IRAKLNALQN
TMKEVG
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