Gene Dshi_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2928 
Symbol 
ID5710779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3086472 
End bp3086963 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID641268854 
Productconserved hypothetical protein UPF0153 family 
Protein accessionYP_001534262 
Protein GI159045468 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0597493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGCC GCAAGGCCAG GCGCCCGGCC AAGGAGACCC TGCGGCCGAG GTTCTGGGAA 
ACCGTGCCTT TGGCCGATAT GACAACGGCG GAGTGGGAGG CGCTGTGCGA CGGCTGCGGC
CGGTGCTGCC TGCTGAAGCT GGAGGACGCG GACACCGCCG AGGTCGCCTT TACCCGGGTC
AGCTGCCGGT TGCTGGACAC CGACACCTGC CGCTGCGGGC AGTACGAGCT GCGCAAGCAA
TTCGTGCCGG ATTGCGTGGT GCTGACGCCG GAAAACCTCG ACCAGATCGC CTACTGGATG
CCGGAGACCT GCGCCTATCG GTTGCTCTAC GAGGGGCAGC GGTTGAAGAC ATGGCATCCG
TTGATCTCGG GGCGGGCCGA AAGCGTGCGG GAGGCGGGGA TCTCCGTCGC GGGCTGGGCC
GTGCCCGAGT TCGAGGTCGC CGAAGACGAG CTTGAGGATT ACCTGATCGA CCCGGACGAC
GCCGGGGCCT GA
 
Protein sequence
MRRRKARRPA KETLRPRFWE TVPLADMTTA EWEALCDGCG RCCLLKLEDA DTAEVAFTRV 
SCRLLDTDTC RCGQYELRKQ FVPDCVVLTP ENLDQIAYWM PETCAYRLLY EGQRLKTWHP
LISGRAESVR EAGISVAGWA VPEFEVAEDE LEDYLIDPDD AGA