Gene Dshi_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2914 
Symbol 
ID5710765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3072942 
End bp3073709 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID641268840 
Productputative alpha/beta hydrolase 
Protein accessionYP_001534248 
Protein GI159045454 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0274125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.502699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCC GCGCGCTTCT TTTGTGTTTC GGCCTGCTGG TGCCGCAAAC GGCCTCGGCG 
GCCTGTGTCG TGCTGTTGCA CGGGCTGGCG CGGAGTGACG CGTCTTTCAC GGTGATGGAG
GCGGTGCTGC GCGGGCTGGG CCATGCGGTG GTCTCGCCCA CCTATCCGTC CACCGAGGCG
ACGGTGGAGG AACTGGCGGC ACAGATTGTG CCCGCCGCCC TGGGCGCCTG CGCGCCCCGG
AAGGCGCATG TGGTCAGCCA TTCCATGGGC GGGATCCTGG TGCGGGCGCA GGCAGCGGTG
GCGCCCCTGG AGAACCTGGG CCGGGTGGTG ATGCTGGCGC CGCCGAACCA GGGCTCGGAG
CTGGTGGATG CGCTGGGCGA CTGGGCGATC TTCCAGTGGG TGAACGGGCC TGCGGGGCGG
CAGCTGGGCA CCGGGCCAGA CAGCCTGCCG AACCGGCTGG GCCCGGTGGG GTTCGAGACC
GGGGTGATCG CGGGCACGTC GAGCTGGAAC CCGCTCTTCT CGCAGCTGTT GCCGGGGCCC
GATGACGGCA AGGTCACGGT GGCGCGGACC AAGGTGGCGG GGATGGCCGA TCACATCATC
CTGCCGGTGT CCCATACCCT GATGATGAAC GACCCCAAGG TGATCGCCCA GACGGTGCAT
TTCCTGGAGA ACGGCCGCTT CGCGCCGGAG ATGAACTATG CCGAGGCGGT GCAGCGGCTG
TTCAACGCTT CGGAGCTGAG CACGCGGCTG GAGGCCCTGG GCGAGTAA
 
Protein sequence
MTFRALLLCF GLLVPQTASA ACVVLLHGLA RSDASFTVME AVLRGLGHAV VSPTYPSTEA 
TVEELAAQIV PAALGACAPR KAHVVSHSMG GILVRAQAAV APLENLGRVV MLAPPNQGSE
LVDALGDWAI FQWVNGPAGR QLGTGPDSLP NRLGPVGFET GVIAGTSSWN PLFSQLLPGP
DDGKVTVART KVAGMADHII LPVSHTLMMN DPKVIAQTVH FLENGRFAPE MNYAEAVQRL
FNASELSTRL EALGE