Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2914 |
Symbol | |
ID | 5710765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3072942 |
End bp | 3073709 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268840 |
Product | putative alpha/beta hydrolase |
Protein accession | YP_001534248 |
Protein GI | 159045454 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0274125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.502699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTTCC GCGCGCTTCT TTTGTGTTTC GGCCTGCTGG TGCCGCAAAC GGCCTCGGCG GCCTGTGTCG TGCTGTTGCA CGGGCTGGCG CGGAGTGACG CGTCTTTCAC GGTGATGGAG GCGGTGCTGC GCGGGCTGGG CCATGCGGTG GTCTCGCCCA CCTATCCGTC CACCGAGGCG ACGGTGGAGG AACTGGCGGC ACAGATTGTG CCCGCCGCCC TGGGCGCCTG CGCGCCCCGG AAGGCGCATG TGGTCAGCCA TTCCATGGGC GGGATCCTGG TGCGGGCGCA GGCAGCGGTG GCGCCCCTGG AGAACCTGGG CCGGGTGGTG ATGCTGGCGC CGCCGAACCA GGGCTCGGAG CTGGTGGATG CGCTGGGCGA CTGGGCGATC TTCCAGTGGG TGAACGGGCC TGCGGGGCGG CAGCTGGGCA CCGGGCCAGA CAGCCTGCCG AACCGGCTGG GCCCGGTGGG GTTCGAGACC GGGGTGATCG CGGGCACGTC GAGCTGGAAC CCGCTCTTCT CGCAGCTGTT GCCGGGGCCC GATGACGGCA AGGTCACGGT GGCGCGGACC AAGGTGGCGG GGATGGCCGA TCACATCATC CTGCCGGTGT CCCATACCCT GATGATGAAC GACCCCAAGG TGATCGCCCA GACGGTGCAT TTCCTGGAGA ACGGCCGCTT CGCGCCGGAG ATGAACTATG CCGAGGCGGT GCAGCGGCTG TTCAACGCTT CGGAGCTGAG CACGCGGCTG GAGGCCCTGG GCGAGTAA
|
Protein sequence | MTFRALLLCF GLLVPQTASA ACVVLLHGLA RSDASFTVME AVLRGLGHAV VSPTYPSTEA TVEELAAQIV PAALGACAPR KAHVVSHSMG GILVRAQAAV APLENLGRVV MLAPPNQGSE LVDALGDWAI FQWVNGPAGR QLGTGPDSLP NRLGPVGFET GVIAGTSSWN PLFSQLLPGP DDGKVTVART KVAGMADHII LPVSHTLMMN DPKVIAQTVH FLENGRFAPE MNYAEAVQRL FNASELSTRL EALGE
|
| |