| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2889 |
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| Symbol | |
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| ID | 5710740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3045531 |
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| End bp | 3046514 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641268815 |
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| Product | putative peptidase |
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| Protein accession | YP_001534223 |
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| Protein GI | 159045429 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00143546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC GGATGCGGCC CGGTCCGCGC AACCTGATCA CCGATGTGGC GGGGCTGCGC
GTGGGTCATG CGCAGGACGC GGGCGTGAAA TCCGGGGTCA CGGTGCTGAC CGCGGACGCC
CCCTTCACCG CCGGGGTGCA TGTCATGGGC GGTGCCCCCG GCACGCGGGA GACGGACCTT
CTGGCCCCGG ACAAGACGGT GGAGCAGGTG GATGCGCTGG TGCTGTCGGG CGGCTCGGCC
CTGGGGCTCG ACGCGGCCTC GGGCGTGGCG GATGCCCTGC GCGCGGCGGG GCGCGGGTTC
GACGTGGGCG GGCAGCGCGT GCCGATCGTG CCCGCTGCGA TCCTCTTCGA TCTGCTCAAT
GGCGGCGACA AGGACTGGAT GGTGAACCCC TATAACTGGC TGGGGCGCGA GGCGCTGGAA
GCCGCAGCAC CCGAGTTCGC GCTGGGCACC GTCGGGGCCG GGACCGGGGC CTTGACCGCG
ACGCTGAAGG GTGGGCTTGG CTCTGCCTCG GTGGTGCTGC CGGACGGGGT GTGCGTGGGC
GCGCTCGTGG CCGTCAATGC GCTGGGCTCG GCGACCATGG GTCCGGGGCG GCATTTCTGG
GCGGCCCCGT TCGAGATGGG CACGGAATTC GGCGGGTTGG GCATGGGCGC GGTCGATCCC
GCGGCGCTGC CTGCAATCAA GGGCGGGCAC AAGACCGCGA CGACCATCGC CATCGTTGCC
ACCGACGCGG CGCTGAGCCA GGCCGCCTGC ACCCGCATGG CGGCGGCCGC CCATGACGGG
ATGGCCCGGG CGCTGGTCCC GTCGCACACG CCCATGGACG GCGATCTGGT CTTTGCGGCC
TCCCACGGGG ACAAGGCGGG CGATCCGCTG ATGATCGGCC ATGCGGCGGC CCTGTGCCTC
GCCCGTGCCA TCGCCCGTGG GGTGTACGCC GCGACGCCGG AGGCGGGCGA CCTGCTGCCC
TGCTGGTCGG ACCTGCCGGG TTAG
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| Protein sequence | MSARMRPGPR NLITDVAGLR VGHAQDAGVK SGVTVLTADA PFTAGVHVMG GAPGTRETDL
LAPDKTVEQV DALVLSGGSA LGLDAASGVA DALRAAGRGF DVGGQRVPIV PAAILFDLLN
GGDKDWMVNP YNWLGREALE AAAPEFALGT VGAGTGALTA TLKGGLGSAS VVLPDGVCVG
ALVAVNALGS ATMGPGRHFW AAPFEMGTEF GGLGMGAVDP AALPAIKGGH KTATTIAIVA
TDAALSQAAC TRMAAAAHDG MARALVPSHT PMDGDLVFAA SHGDKAGDPL MIGHAAALCL
ARAIARGVYA ATPEAGDLLP CWSDLPG
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